RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 FBXO16Q8IX29 292 aaPredicted RBP23.94■■□□□ 1.42
C4orf48-201ENST00000409248 TBC1D5Q92609 795 aa23.94■■□□□ 1.42
C4orf48-201ENST00000409248 GTF3C6Q969F1 213 aa23.94■■□□□ 1.42
C4orf48-201ENST00000409248 GCOM1H8Y6P7 765 aaPredicted RBP23.93■■□□□ 1.42
C4orf48-201ENST00000409248 DUSP11O75319 330 aaKnown RBP23.93■■□□□ 1.42
C4orf48-201ENST00000409248 POLR2MP0CAP2 368 aa23.93■■□□□ 1.42
C4orf48-201ENST00000409248 EDNRBP24530 442 aa23.93■■□□□ 1.42
C4orf48-201ENST00000409248 RNF180Q86T96 592 aa23.93■■□□□ 1.42
C4orf48-201ENST00000409248 RMDN3Q96TC7 470 aa23.93■■□□□ 1.42
C4orf48-201ENST00000409248 CDKL5O76039 1030 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 MYCNP04198 464 aaPredicted RBP23.92■■□□□ 1.42
C4orf48-201ENST00000409248 ARHGEF16Q5VV41 709 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 EEPD1Q7L9B9 569 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 NECAB1Q8N987 351 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 SNX21Q969T3 373 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 LENG1Q96BZ8 264 aaPredicted RBP23.92■■□□□ 1.42
C4orf48-201ENST00000409248 IWS1Q96ST2 819 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 SPC25Q9HBM1 224 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 COL20A1Q9P218 1284 aa23.92■■□□□ 1.42
C4orf48-201ENST00000409248 TNRC18O15417 2968 aaPredicted RBP23.92■■□□□ 1.42
C4orf48-201ENST00000409248 SYNRGQ9UMZ2 1314 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 TNFAIP2Q03169 654 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 LRRC41Q15345 812 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 GJC2Q5T442 439 aaPredicted RBP23.91■■□□□ 1.42
C4orf48-201ENST00000409248 HEATR3Q7Z4Q2 680 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 HSCBQ8IWL3 235 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 CUL5Q93034 780 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 TMX3Q96JJ7 454 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 TAAR1Q96RJ0 339 aa23.91■■□□□ 1.42
C4orf48-201ENST00000409248 RBM27Q9P2N5 1060 aaKnown RBP23.91■■□□□ 1.42
C4orf48-201ENST00000409248 DDX49Q9Y6V7 483 aaKnown RBP23.91■■□□□ 1.42
C4orf48-201ENST00000409248 hCG_1984214I3L0E3 225 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 PGK1P00558 417 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 COL6A1P12109 1028 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 IFNAR1P17181 557 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 HOXA13P31271 388 aaPredicted RBP23.9■■□□□ 1.42
C4orf48-201ENST00000409248 FUT2Q10981 343 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 IQSEC1Q6DN90 963 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 ZNF713Q8N859 430 aaPredicted RBP23.9■■□□□ 1.42
C4orf48-201ENST00000409248 PXMP2Q9NR77 195 aa23.9■■□□□ 1.42
C4orf48-201ENST00000409248 hCG_1642624A0A1W2PR95 340 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 EIF2AK2P19525 551 aaKnown RBP23.89■■□□□ 1.41
C4orf48-201ENST00000409248 ADCYAP1R1P41586 468 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 AKAP17AQ02040 695 aaKnown RBP23.89■■□□□ 1.41
C4orf48-201ENST00000409248 NTRK3Q16288 839 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 TAPT1Q6NXT6 567 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 PPP1R18Q6NYC8 613 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 CCDC83Q8IWF9 413 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 TRIM22Q8IYM9 498 aa23.89■■□□□ 1.41
C4orf48-201ENST00000409248 MKI67P46013 3256 aaKnown RBP23.89■■□□□ 1.41
C4orf48-201ENST00000409248 ADCY6O43306 1168 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 ADAMTS4O75173 837 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 STXBP2Q15833 593 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 TLK2Q86UE8 772 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 SMARCC2Q8TAQ2 1214 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 SCFD2Q8WU76 684 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 DPF3Q92784 378 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 UPF3AQ9H1J1 476 aaKnown RBP23.88■■□□□ 1.41
C4orf48-201ENST00000409248 ALPK3Q96L96 1907 aa23.88■■□□□ 1.41
C4orf48-201ENST00000409248 KIAA1217Q5T5P2 1943 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 K7ELQ4 463 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 PIK3CDO00329 1044 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 C6orf222P0C671 652 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 CST5P28325 142 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 GJA9P57773 515 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 SSRP1Q08945 709 aaKnown RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 FCHSD1Q86WN1 690 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 TEX2Q8IWB9 1127 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 GPKOWQ92917 476 aaPredicted RBP eCLIP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 PHKBQ93100 1093 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 SLC26A6Q9BXS9 759 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 RNF26Q9BY78 433 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 PDGFCQ9NRA1 345 aa23.87■■□□□ 1.41
C4orf48-201ENST00000409248 V9GY48 417 aaPredicted RBP23.87■■□□□ 1.41
C4orf48-201ENST00000409248 RBM47A0AV96 593 aaKnown RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 PRPF3O43395 683 aaKnown RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 NAPAP54920 295 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 ST3GAL1Q11201 340 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 DUSP28Q4G0W2 176 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 WWC2Q6AWC2 1192 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 PDCD2LQ9BRP1 358 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 LLPHQ9BRT6 129 aaKnown RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 TSEN34Q9BSV6 310 aaKnown RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 WDR11Q9BZH6 1224 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 SENP6Q9GZR1 1112 aaPredicted RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 AP5M1Q9H0R1 490 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 PSTPIP2Q9H939 334 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 PHF24Q9UPV7 400 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 GNEQ9Y223 722 aaKnown RBP23.86■■□□□ 1.41
C4orf48-201ENST00000409248 Q9Y3F1 56 aa23.86■■□□□ 1.41
C4orf48-201ENST00000409248 NKRFO15226 690 aaKnown RBP eCLIP23.85■■□□□ 1.41
C4orf48-201ENST00000409248 NR3C2P08235 984 aa23.85■■□□□ 1.41
C4orf48-201ENST00000409248 SMPD1P17405 629 aa23.85■■□□□ 1.41
C4orf48-201ENST00000409248 PCSK9Q8NBP7 692 aaKnown RBP23.85■■□□□ 1.41
C4orf48-201ENST00000409248 NR2E3Q9Y5X4 410 aa23.85■■□□□ 1.41
C4orf48-201ENST00000409248 FRMPD4Q14CM0 1322 aa23.84■■□□□ 1.41
C4orf48-201ENST00000409248 MOXD2PA6NHM9 499 aa23.84■■□□□ 1.41
C4orf48-201ENST00000409248 EVI5O60447 810 aa23.84■■□□□ 1.41
C4orf48-201ENST00000409248 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms