RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RAD9AQ99638 391 aa15.27■□□□□ 0.04
CHRNA1-203ENST00000409219 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
CHRNA1-203ENST00000409219 ADD3Q9UEY8 706 aaKnown RBP15.27■□□□□ 0.04
CHRNA1-203ENST00000409219 TRIOO75962 3097 aa15.27■□□□□ 0.04
CHRNA1-203ENST00000409219 RAD50Q92878 1312 aa15.27■□□□□ 0.04
CHRNA1-203ENST00000409219 A6NJR5 290 aa15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 NFIBO00712 420 aa15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 TDO2P48775 406 aa15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 PTGISQ16647 500 aa15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 BRDTQ58F21 947 aaPredicted RBP15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 ANKS1AQ92625 1134 aa15.27■□□□□ 0.03
CHRNA1-203ENST00000409219 LOC102724159A0A0B4J2E5 919 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 H3BQ06 376 aaPredicted RBP15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 GPAA1O43292 621 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 CXCL10P02778 98 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 ICAM1P05362 532 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 SELPP16109 830 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 PWP2Q15269 919 aaKnown RBP15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 HFE2Q6ZVN8 426 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 CCDC155Q8N6L0 562 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 DHX38Q92620 1227 aaKnown RBP15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 C17orf80Q9BSJ5 609 aa15.26■□□□□ 0.03
CHRNA1-203ENST00000409219 MICAL3Q7RTP6 2002 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 NKRFO15226 690 aaKnown RBP eCLIP15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 KPNA6O60684 536 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 NBNO60934 754 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 RAB11FIP3O75154 756 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 CHMP4BP1P59074 171 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 ZP2Q05996 745 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 RBL2Q08999 1139 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 PUS10Q3MIT2 529 aaKnown RBP15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 SLC30A10Q6XR72 485 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 FBXO22Q8NEZ5 403 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 PANK1Q8TE04 598 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 APPBP2Q92624 585 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 ATG2AQ2TAZ0 1938 aa15.25■□□□□ 0.03
CHRNA1-203ENST00000409219 ABHD14A-ACY1A0A1B0GW23 586 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 TFAP4Q01664 338 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 FAM117BQ6P1L5 589 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 SCFD2Q8WU76 684 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 PHOX2BQ99453 314 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 RANBP17Q9H2T7 1088 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 CFAP54Q96N23 3096 aa15.24■□□□□ 0.03
CHRNA1-203ENST00000409219 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 M0R2C6 588 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 HMMRO75330 724 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 ARIH2O95376 493 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 EDNRBP24530 442 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 MRPL38Q96DV4 380 aaKnown RBP15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 CRBNQ96SW2 442 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 STX8Q9UNK0 236 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 NLRC5Q86WI3 1866 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 TECTAO75443 2155 aa15.23■□□□□ 0.03
CHRNA1-203ENST00000409219 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 CKBP12277 381 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 CALML3P27482 149 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 PDE4BQ07343 736 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 PDE4DQ08499 809 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 IFNL3Q8IZI9 196 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 PRKAG3Q9UGI9 489 aa15.22■□□□□ 0.03
CHRNA1-203ENST00000409219 EFCAB14O75071 495 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 APPP05067 770 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 TXNP10599 105 aaKnown RBP15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 GNAT2P19087 354 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 IRS1P35568 1242 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 COL19A1Q14993 1142 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 TIGD5Q53EQ6 642 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 CLEC4DQ8WXI8 215 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 KAT2BQ92831 832 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 PABPC5Q96DU9 382 aaKnown RBP15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 IL17RBQ9NRM6 502 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 MTMR7Q9Y216 660 aa15.21■□□□□ 0.03
CHRNA1-203ENST00000409219 MYO7AQ13402 2215 aa15.21■□□□□ 0.02
CHRNA1-203ENST00000409219 NMT2O60551 498 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 MMP3P08254 477 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 SLC16A2P36021 539 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 HTRA4P83105 476 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 IKBKEQ14164 716 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 MBTPS1Q14703 1052 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 TRAF7Q6Q0C0 670 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 ADHFE1Q8IWW8 467 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 AFG1LQ8WV93 481 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
CHRNA1-203ENST00000409219 INSL6Q9Y581 213 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms