RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 OR9Q1Q8NGQ5 310 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 ING2Q9H160 280 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 NPC1L1Q9UHC9 1359 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 ESRRAP11474 423 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
SHANK2-203ENST00000409161 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-203ENST00000409161 MFAP3P55082 362 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-203ENST00000409161 TTC19Q6DKK2 380 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-203ENST00000409161 NEK9Q8TD19 979 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 MED10Q9BTT4 135 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 TLK1Q9UKI8 766 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 ZNF189O75820 626 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-203ENST00000409161 APOA1P02647 267 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 IL1RL1Q01638 556 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 CAV1Q03135 178 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 SESTD1Q86VW0 696 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 EHHADHQ08426 723 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 MED7O43513 233 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 CYP2J2P51589 502 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 MDM2Q00987 491 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-203ENST00000409161 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
SHANK2-203ENST00000409161 H3BRJ5 948 aa13.15□□□□□ -0.31
SHANK2-203ENST00000409161 GAP43P17677 238 aa13.15□□□□□ -0.31
SHANK2-203ENST00000409161 TADA2BQ86TJ2 420 aa13.15□□□□□ -0.31
SHANK2-203ENST00000409161 TRIM59Q8IWR1 403 aa13.15□□□□□ -0.31
SHANK2-203ENST00000409161 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.31
SHANK2-203ENST00000409161 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.31
SHANK2-203ENST00000409161 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PODXLO00592 558 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 TADA3O75528 432 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PHKBQ93100 1093 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PDE6AP16499 860 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 FAM133BQ5BKY9 247 aaKnown RBP13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ICE2Q659A1 982 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 CFAP73A6NFT4 308 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 BUB1O43683 1085 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ITKQ08881 620 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
SHANK2-203ENST00000409161 IL2RBP14784 551 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 DPH5Q9H2P9 285 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 SMYD2Q9NRG4 433 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 K7ENM7 598 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 TTLL7Q6ZT98 887 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PCGF5Q86SE9 256 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 H7C0C1 242 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 DDAH1O94760 285 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PAMP19021 973 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ATP5OP48047 213 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 MYL7Q01449 175 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 SPARCL1Q14515 664 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 BLIDQ8IZY5 108 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 LPIN2Q92539 896 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 CCDC159P0C7I6 412 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 GRAMD1BQ3KR37 738 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
SHANK2-203ENST00000409161 CDV3Q9UKY7 258 aaKnown RBP13.14□□□□□ -0.31
SHANK2-203ENST00000409161 MT-ND3P03897 115 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 TRMT44Q8IYL2 757 aaKnown RBP13.13□□□□□ -0.31
SHANK2-203ENST00000409161 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 TMEM63CQ9P1W3 806 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
SHANK2-203ENST00000409161 NSFL1CQ9UNZ2 370 aaKnown RBP13.13□□□□□ -0.31
SHANK2-203ENST00000409161 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 MYCLP12524 364 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-203ENST00000409161 TMOD1P28289 359 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 CEP70Q8NHQ1 597 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 ATP6V1E2Q96A05 226 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 SHANK2Q9UPX8 1470 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 TAC1P20366 129 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 ATP2B4P23634 1241 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 ICA1LQ8NDH6 482 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 KIF2CQ99661 725 aa13.13□□□□□ -0.31
SHANK2-203ENST00000409161 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms