RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FAN1Q9Y2M0 1017 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 SPEF1Q9Y4P9 236 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 EID1Q9Y6B2 187 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 PHLDB1Q86UU1 1377 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 ASXL2Q76L83 1435 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 CBX4O00257 560 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 CEACAM5P06731 702 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 PYGMP11217 842 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 BPIP17213 487 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 TPP2P29144 1249 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 LTKP29376 864 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 ADMP35318 185 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 IL2P60568 153 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 TTF1Q15361 905 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 SEPT7Q16181 437 aaKnown RBP6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 FBXL6Q8N531 539 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 NAT16Q8N8M0 369 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 TP53INP1Q96A56 240 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 SYTL4Q96C24 671 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 MFSD14AQ96MC6 490 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 DUSP13Q9UII6 198 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 PCDHA8Q9Y5H6 950 aa6.37□□□□□ -1.39
HMGB3P18-201ENST00000406327 E2F8A0AVK6 867 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 FAM170BA6NMN3 283 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 WNT9AO14904 365 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 FGF10O15520 208 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 COBLO75128 1261 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 F2P00734 622 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 OXCT1P55809 520 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 ST5P78524 1137 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 TMPRSS15P98073 1019 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 ITKQ08881 620 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 CDKAL1Q5VV42 579 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 PRR23CQ6ZRP0 262 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 FBXW5Q969U6 566 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 MTMR8Q96EF0 704 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 PTCHD1Q96NR3 888 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 CDADC1Q9BWV3 514 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 SNX11Q9Y5W9 270 aa6.36□□□□□ -1.39
HMGB3P18-201ENST00000406327 ULK1O75385 1050 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 KATNA1O75449 491 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 SOD2P04179 222 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 LSSP48449 732 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 NEK2P51955 445 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 NFIAQ12857 509 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 ARHGAP44Q17R89 818 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 MCTP1Q6DN14 999 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 SPACA3Q8IXA5 215 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 CHST14Q8NCH0 376 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 C8orf48Q96LL4 319 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 FOXP3Q9BZS1 431 aa6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 THRAP3Q9Y2W1 955 aaKnown RBP6.35□□□□□ -1.39
HMGB3P18-201ENST00000406327 TMEM265A0A087WTH1 108 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 H3BS24 57 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 M0R2C6 588 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 NEMP1O14524 444 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 PAX4O43316 350 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 NPHS1O60500 1241 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 GLRX3O76003 335 aaKnown RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 GRK2P25098 689 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 GRK3P35626 688 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 MTMR1Q13613 665 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 IFI16Q16666 785 aaKnown RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 NKPD1Q17RQ9 610 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 GAB4Q2WGN9 574 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 TMEM177Q53S58 311 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 RTP2Q5QGT7 225 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 IQSEC1Q6DN90 963 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 SLC51AQ86UW1 340 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 CCDC103Q8IW40 242 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 CCAR1Q8IX12 1150 aaKnown RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 USHBP1Q8N6Y0 703 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 PCDH19Q8TAB3 1148 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 ZSWIM5Q9P217 1185 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 B4GALT6Q9UBX8 382 aa6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 TMEFF2Q9UIK5 374 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 TIMM13Q9Y5L4 95 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P18-201ENST00000406327 CCDC66A2RUB6 948 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 FKBP9O95302 570 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 F13BP05160 661 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 SRGAP2CP0DJJ0 459 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 YBX3P16989 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 KCNA6P17658 529 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 TXKP42681 527 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 DSG1Q02413 1049 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 LSAMPQ13449 338 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 LAPTM5Q13571 262 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 NFE2Q16621 373 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 ATP13A4Q4VNC1 1196 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 FKBP9P1Q75LS8 142 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 C16orf59Q7L2K0 433 aa6.33□□□□□ -1.4
HMGB3P18-201ENST00000406327 RCBTB1Q8NDN9 531 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms