RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 PDE4DQ08499 809 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 PWP2Q15269 919 aaKnown RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 PKN1Q16512 942 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 ME3Q16798 604 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 ARHGEF16Q5VV41 709 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 USP17L6PQ6QN14 398 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 RNF26Q9BY78 433 aaPredicted RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 PSTPIP2Q9H939 334 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 PXMP2Q9NR77 195 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 PDGFCQ9NRA1 345 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 FAM184BQ9ULE4 1060 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 B4DLN1 442 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 DTNBO60941 627 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 SCG2P13521 617 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 MRPL12P52815 198 aaKnown RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 TAPT1Q6NXT6 567 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 NECAB1Q8N987 351 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 CUL5Q93034 780 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 TBC1D32Q96NH3 1257 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 MPHOSPH6Q99547 160 aaKnown RBP16.79■□□□□ 0.28
CDPF1-203ENST00000404583 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
CDPF1-203ENST00000404583 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.78■□□□□ 0.28
CDPF1-203ENST00000404583 hCG_1984214I3L0E3 225 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 ADCY6O43306 1168 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 RARBP10826 455 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 ADCYAP1R1P41586 468 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 UBE2SQ16763 222 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
CDPF1-203ENST00000404583 ZNF713Q8N859 430 aaPredicted RBP16.78■□□□□ 0.28
CDPF1-203ENST00000404583 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 VTA1Q9NP79 307 aa16.78■□□□□ 0.28
CDPF1-203ENST00000404583 RBM27Q9P2N5 1060 aaKnown RBP16.78■□□□□ 0.28
CDPF1-203ENST00000404583 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.28
CDPF1-203ENST00000404583 SMCO2A6NFE2 343 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 PIK3CDO00329 1044 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 NR3C2P08235 984 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 CAPN2P17655 700 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.27
CDPF1-203ENST00000404583 TMEM63BQ5T3F8 832 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 DIS3LQ8TF46 1054 aaKnown RBP16.77■□□□□ 0.27
CDPF1-203ENST00000404583 PDCD2LQ9BRP1 358 aa16.77■□□□□ 0.27
CDPF1-203ENST00000404583 FARP2O94887 1054 aaPredicted RBP16.76■□□□□ 0.27
CDPF1-203ENST00000404583 PGK1P00558 417 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
CDPF1-203ENST00000404583 MYCLP12524 364 aaPredicted RBP16.76■□□□□ 0.27
CDPF1-203ENST00000404583 TNFAIP2Q03169 654 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 PGM5Q15124 567 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 RABEP1Q15276 862 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 STXBP2Q15833 593 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 PPP1R18Q6NYC8 613 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 ANKLE1Q8NAG6 615 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 IL31RAQ8NI17 732 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 PAWRQ96IZ0 340 aaKnown RBP16.76■□□□□ 0.27
CDPF1-203ENST00000404583 RIC8AQ9NPQ8 531 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 XPNPEP3Q9NQH7 507 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
CDPF1-203ENST00000404583 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
CDPF1-203ENST00000404583 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 SMPD1P17405 629 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 PTGS1P23219 599 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 ADCY7P51828 1080 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 GJC2Q5T442 439 aaPredicted RBP16.75■□□□□ 0.27
CDPF1-203ENST00000404583 IQSEC1Q6DN90 963 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
CDPF1-203ENST00000404583 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
CDPF1-203ENST00000404583 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
CDPF1-203ENST00000404583 CDKL5O76039 1030 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 DEXIO95424 95 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 IRX5P78411 483 aaPredicted RBP16.74■□□□□ 0.27
CDPF1-203ENST00000404583 LRRC41Q15345 812 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 ARRDC4Q8NCT1 418 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 AIFM3Q96NN9 605 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 WDR11Q9BZH6 1224 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
CDPF1-203ENST00000404583 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
CDPF1-203ENST00000404583 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 ADAMTS4O75173 837 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 EIF3JO75822 258 aaKnown RBP16.73■□□□□ 0.27
CDPF1-203ENST00000404583 CCND2P30279 289 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 NECAB2Q7Z6G3 386 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 ZMYND12Q9H0C1 365 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 FRMPD4Q14CM0 1322 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
CDPF1-203ENST00000404583 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 SPDYE3A6NKU9 549 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
CDPF1-203ENST00000404583 ARIH2O95376 493 aa16.72■□□□□ 0.27
CDPF1-203ENST00000404583 MRPS9P82933 396 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms