RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 GOLGA6BA6NDN3 693 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 AGPSO00116 658 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
RBM39-206ENST00000403542 CCNI2Q6ZMN8 369 aaPredicted RBP13.32□□□□□ -0.28
RBM39-206ENST00000403542 CACNA2D4Q7Z3S7 1137 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 KCNK18Q7Z418 384 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 DHTKD1Q96HY7 919 aaPredicted RBP13.32□□□□□ -0.28
RBM39-206ENST00000403542 EYA3Q99504 573 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 NDST4Q9H3R1 872 aa13.32□□□□□ -0.28
RBM39-206ENST00000403542 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 GNPATO15228 680 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 RASA1P20936 1047 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 TNNI2P48788 182 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 VAV2P52735 878 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 PICALMQ13492 652 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 UBE2SQ16763 222 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 CREG2Q8IUH2 290 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 IFT81Q8WYA0 676 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 CKAP4Q07065 602 aaKnown RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 AMOTL1Q8IY63 956 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 CEP95Q96GE4 821 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 MED4Q9NPJ6 270 aa13.31□□□□□ -0.28
RBM39-206ENST00000403542 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
RBM39-206ENST00000403542 BICDL2A1A5D9 508 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 MARCH6O60337 910 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 PRPF6O94906 941 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 FTCDO95954 541 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SLC1A4P43007 532 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 MAGEA1P43355 309 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 SV2BQ7L1I2 683 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SH2D3CQ8N5H7 860 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SPATA4Q8NEY3 305 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 GOLPH3Q9H4A6 298 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SNX12Q9UMY4 172 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 TACC1O75410 805 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 CCT5P48643 541 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 ATP1A2P50993 1020 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 VWA3BQ502W6 1294 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 MTMR8Q96EF0 704 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■□□□□ 8.8
RBM39-206ENST00000403542 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 SAMM50Q9Y512 469 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 PALM3A6NDB9 673 aaPredicted RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 IVLP07476 585 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 TRADDQ15628 312 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 CALCRLQ16602 461 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 TSEN2Q8NCE0 465 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 SNX29Q8TEQ0 813 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 OSBPL9Q96SU4 736 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 C6orf50Q9HD87 102 aa13.3□□□□□ -0.28
RBM39-206ENST00000403542 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
RBM39-206ENST00000403542 NPHP3-ACAD11A0A0J9YXS1 232 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
RBM39-206ENST00000403542 SLC16A2P36021 539 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 BTDP43251 543 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 CDK8P49336 464 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 GRB10Q13322 594 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 SH3GLB2Q9NR46 395 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 KRT14P02533 472 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 GNAQP50148 359 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 TEX11Q8IYF3 940 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 FAM76AQ8TAV0 307 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 DDX12PQ92771 950 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 ARL8AQ96BM9 186 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 NUP58Q9BVL2 599 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 MKRN1Q9UHC7 482 aaKnown RBP13.29□□□□□ -0.28
RBM39-206ENST00000403542 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
RBM39-206ENST00000403542 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
RBM39-206ENST00000403542 TRAF5O00463 557 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 ECM1Q16610 540 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 FAM114A1Q8IWE2 563 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
RBM39-206ENST00000403542 JRKLQ9Y4A0 524 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms