RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 PRCPP42785 496 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 ARHGAP4P98171 946 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 AMPD3Q01432 767 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 Q4G0T1 1027 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 HYIQ5T013 277 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 MICALL2Q8IY33 904 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
CLIP4-203ENST00000401617 GTPBP4Q9BZE4 634 aaKnown RBP13.79□□□□□ -0.2
CLIP4-203ENST00000401617 KCND1Q9NSA2 647 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
CLIP4-203ENST00000401617 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
CLIP4-203ENST00000401617 GDAQ9Y2T3 454 aa13.79□□□□□ -0.2
CLIP4-203ENST00000401617 POTEMA6NI47 508 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
CLIP4-203ENST00000401617 STX17P56962 302 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 PAK1Q13153 545 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 TBX2Q13207 712 aaPredicted RBP13.78□□□□□ -0.2
CLIP4-203ENST00000401617 USH1GQ495M9 461 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
CLIP4-203ENST00000401617 FEM1BQ9UK73 627 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 CTNND2Q9UQB3 1225 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 TBX3O15119 743 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 CYP3A4P08684 503 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 TERF1P54274 439 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 LENG9Q96B70 501 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 NUDT12Q9BQG2 462 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
CLIP4-203ENST00000401617 SKILP12757 684 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 KRT79Q5XKE5 535 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 SV2BQ7L1I2 683 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 NELFBQ8WX92 580 aa13.77□□□□□ -0.21
CLIP4-203ENST00000401617 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 SPDYE3A6NKU9 549 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 CTNND1O60716 968 aaKnown RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 KCNJ6P48051 423 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 SLFN12Q8IYM2 578 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 NLGN2Q8NFZ4 835 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 SNX29Q8TEQ0 813 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 LARP4BQ92615 738 aaKnown RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 RAD54LQ92698 747 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 ADD3Q9UEY8 706 aaKnown RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 LIMA1Q9UHB6 759 aaKnown RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 SBF1O95248 1867 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 TAL1P17542 331 aaPredicted RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 ECM1Q16610 540 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 UPF1Q92900 1129 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 KIAA1683Q9H0B3 1180 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
CLIP4-203ENST00000401617 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
CLIP4-203ENST00000401617 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 H7C1D1 291 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 HOXA7P31268 230 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 PBX1P40424 430 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 MCM6Q14566 821 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 KIF4BQ2VIQ3 1234 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 TBC1D10BQ4KMP7 808 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 DHTKD1Q96HY7 919 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 CDK5RAP3Q96JB5 506 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 MYMKA6NI61 221 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 FAM86B1E9PN63 330 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 FAM86B2P0C5J1 330 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 PPP1R2P41236 205 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 ASIC1P78348 528 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 SPECC1LQ69YQ0 1117 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 LPAR1Q92633 364 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 GJA10Q969M2 543 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 ZNF341Q9BYN7 854 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 LRRC27Q9C0I9 530 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 FBXO28Q9NVF7 368 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 ZNF112Q9UJU3 913 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 MRPL11Q9Y3B7 192 aaKnown RBP13.75□□□□□ -0.21
CLIP4-203ENST00000401617 GJA3Q9Y6H8 435 aa13.75□□□□□ -0.21
CLIP4-203ENST00000401617 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 ABCB11O95342 1321 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
CLIP4-203ENST00000401617 MARCH6O60337 910 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 HOXA13P31271 388 aaPredicted RBP13.74□□□□□ -0.21
CLIP4-203ENST00000401617 INPP5BP32019 993 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 SPAG1Q07617 926 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 STIM1Q13586 685 aa13.74□□□□□ -0.21
CLIP4-203ENST00000401617 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
CLIP4-203ENST00000401617 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms