RNA–Protein interactions for RNA: ENST00000400436.6

SNHG11-202, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 2

Gene SNHG11, Length 2,652 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-202ENST00000400436 SMARCC1Q92922 1105 aaPredicted RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 MED4Q9NPJ6 270 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 PCDHA13Q9Y5I0 950 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 LAD1O00515 517 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 TDP2O95551 362 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 BAG3O95817 575 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 CDK8P49336 464 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 KIF11P52732 1056 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 NAP1L1P55209 391 aaKnown RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 TMED8Q6PL24 325 aaPredicted RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 SRLQ86TD4 932 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 CLEC10AQ8IUN9 316 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 AFAP1L1Q8TED9 768 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 RRP36Q96EU6 259 aaKnown RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 CEP95Q96GE4 821 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 NUDT12Q9BQG2 462 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 NDST4Q9H3R1 872 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 KANSL2Q9H9L4 492 aa17.26■□□□□ 0.35
SNHG11-202ENST00000400436 DMGDHQ9UI17 866 aaKnown RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 COL22A1Q8NFW1 1626 aaPredicted RBP17.26■□□□□ 0.35
SNHG11-202ENST00000400436 LRRC53A6NM62 1247 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 BUB1O43683 1085 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 SLC37A4O43826 429 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 ENOX2Q16206 610 aaKnown RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 CCNI2Q6ZMN8 369 aaPredicted RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 ANKS1AQ92625 1134 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 CDK5RAP3Q96JB5 506 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 AK8Q96MA6 479 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 TM4SF1P30408 202 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 BTDP43251 543 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 AMPD3Q01432 767 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 GRB10Q13322 594 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 REXO1Q8N1G1 1221 aaKnown RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 RETREG2Q8NC44 543 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 NLRC4Q9NPP4 1024 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 BLOC1S4Q9NUP1 217 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 TBC1D7Q9P0N9 293 aa17.25■□□□□ 0.35
SNHG11-202ENST00000400436 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
SNHG11-202ENST00000400436 CREG2Q8IUH2 290 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 ERGIC2Q96RQ1 377 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 SALL4Q9UJQ4 1053 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 USO1O60763 962 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 PRPF6O94906 941 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 GNA11P29992 359 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 APBA1Q02410 837 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 GFPT1Q06210 699 aaPredicted RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 CALCRLQ16602 461 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 SND1Q7KZF4 910 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 KCNK18Q7Z418 384 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 CUEDC2Q9H467 287 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 ZC3H4Q9UPT8 1303 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 TACC1O75410 805 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 SSBP05455 408 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 RASSF7Q02833 373 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 DNAJC21Q5F1R6 531 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 TTC19Q6DKK2 380 aaPredicted RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 ZSCAN29Q8IWY8 852 aaPredicted RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 TEX11Q8IYF3 940 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
SNHG11-202ENST00000400436 RASSF4Q9H2L5 321 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 PLAGL2Q9UPG8 496 aa17.24■□□□□ 0.35
SNHG11-202ENST00000400436 AGPSO00116 658 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 TDRD12Q587J7 1177 aaKnown RBP17.23■□□□□ 0.35
SNHG11-202ENST00000400436 PNMA5Q96PV4 448 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 PURBQ96QR8 312 aaKnown RBP17.23■□□□□ 0.35
SNHG11-202ENST00000400436 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 SIK3Q9Y2K2 1263 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 IVLP07476 585 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 MCM3P25205 808 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 ARID5AQ03989 594 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 CCDC181Q5TID7 509 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 CACNA2D4Q7Z3S7 1137 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 TRIM58Q8NG06 486 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 LARP4BQ92615 738 aaKnown RBP17.23■□□□□ 0.35
SNHG11-202ENST00000400436 MS4A14Q96JA4 679 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 SPZ1Q9BXG8 430 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 NARFQ9UHQ1 456 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 JRKLQ9Y4A0 524 aa17.23■□□□□ 0.35
SNHG11-202ENST00000400436 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
SNHG11-202ENST00000400436 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
SNHG11-202ENST00000400436 TARSL2A2RTX5 802 aaKnown RBP17.22■□□□□ 0.35
SNHG11-202ENST00000400436 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
SNHG11-202ENST00000400436 TNNI2P48788 182 aa17.22■□□□□ 0.35
SNHG11-202ENST00000400436 CACNB1Q02641 598 aaPredicted RBP17.22■□□□□ 0.35
SNHG11-202ENST00000400436 SNX29Q8TEQ0 813 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms