RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 RASGRF1Q13972 1273 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 EXOC3L4Q17RC7 722 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 EPHA10Q5JZY3 1008 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 LIN9Q5TKA1 542 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 SPATA1Q5VX52 437 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 SUSD4Q5VX71 490 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 TTC19Q6DKK2 380 aaPredicted RBP3.58□□□□□ -1.84
KNL1-202ENST00000399668 TTBK2Q6IQ55 1244 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 SEPT14Q6ZU15 432 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 C11orf57Q6ZUT1 292 aaPredicted RBP3.58□□□□□ -1.84
KNL1-202ENST00000399668 ANKRD13CQ8N6S4 541 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 TRIM58Q8NG06 486 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 CACTINQ8WUQ7 758 aaKnown RBP3.58□□□□□ -1.84
KNL1-202ENST00000399668 PPP1R13BQ96KQ4 1090 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 PYCARDQ9ULZ3 195 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 PPP2R2CQ9Y2T4 447 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 LEMD3Q9Y2U8 911 aa3.58□□□□□ -1.84
KNL1-202ENST00000399668 DIP2CQ9Y2E4 1556 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ZNF853P0CG23 659 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PLCG1P19174 1290 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CASP1P29466 404 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 OAS2P29728 719 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 PIK3CAP42336 1068 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 LIG4P49917 911 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 IGBP1P78318 339 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CAPN12Q6ZSI9 719 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SYCE1Q8N0S2 351 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 U2AF1L4Q8WU68 220 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 ARHGEF2Q92974 986 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 NAP1L4Q99733 375 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 ZNF577Q9BSK1 485 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RNF26Q9BY78 433 aaPredicted RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 DISC1Q9NRI5 854 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ZNF215Q9UL58 517 aaPredicted RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 EXOC7Q9UPT5 735 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TRPC6Q9Y210 931 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RABGAP1Q9Y3P9 1069 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PCDHB6Q9Y5E3 794 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ZFC3H1O60293 1989 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 UBN2Q6ZU65 1347 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 DKC1O60832 514 aaKnown RBP eCLIP3.57□□□□□ -1.84
KNL1-202ENST00000399668 PPP6R2O75170 966 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 HOXA13P31271 388 aaPredicted RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 LONP1P36776 959 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 ADAM9Q13443 819 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CUL4AQ13619 759 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 FAM47CQ5HY64 1035 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TBC1D9BQ66K14 1250 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ARMCX5Q6P1M9 558 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 GBP6Q6ZN66 633 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 INTS8Q75QN2 995 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 SH3RF3Q8TEJ3 882 aaPredicted RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 RSAD2Q8WXG1 361 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SAMSN1Q9NSI8 373 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 NKIRAS1Q9NYS0 192 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CACNA1IQ9P0X4 2223 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SOWAHDA6NJG2 315 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SFI1A8K8P3 1242 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TMEM232C9JQI7 657 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 NMT2O60551 498 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 IGKV5-2P06315 115 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 POLR2MP0CAP2 368 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ATP5DP30049 168 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SLC39A14Q15043 492 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 LRRC41Q15345 812 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 KRT71Q3SY84 523 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ASPRV1Q53RT3 343 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ODR4Q5SWX8 454 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SCYL2Q6P3W7 929 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 MIER3Q7Z3K6 550 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 NCAPG2Q86XI2 1143 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PLA2G4DQ86XP0 818 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TTLL11Q8NHH1 800 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 FAM204AQ9H8W3 233 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 MLXIPQ9HAP2 919 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 MRPL11Q9Y3B7 192 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 STK24Q9Y6E0 443 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 USP32Q8NFA0 1604 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 MPDZO75970 2070 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 GDF11O95390 407 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PLEKHA8P1O95397 391 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CACNB3P54284 484 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 GABPAQ06546 454 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 EHHADHQ08426 723 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RBL2Q08999 1139 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 LONRF2Q1L5Z9 754 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SLFN13Q68D06 897 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TAOK1Q7L7X3 1001 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SUPT20HQ8NEM7 779 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 KIAA1524Q8TCG1 905 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RILPQ96NA2 401 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SMC6Q96SB8 1091 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RAB17Q9H0T7 212 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ATG3Q9NT62 314 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 POLR3EQ9NVU0 708 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CYP27B1O15528 508 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 DDAH1O94760 285 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SERPINB2P05120 415 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 KRT15P19012 456 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 NR2F2P24468 414 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms