RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 CUL4AQ13619 759 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 VPS50Q96JG6 964 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 PRR23AA6NEV1 266 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 CASP8Q14790 479 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ELMSAN1Q6PJG2 1045 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 RNASE11Q8TAA1 199 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 SYMPKQ92797 1274 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 LRRIQ3A6PVS8 624 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ATF7P17544 494 aaPredicted RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 HADHQ16836 314 aaKnown RBP9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 IQUBQ8NA54 791 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 MOSPD2Q8NHP6 518 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 TADA3O75528 432 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 ARHGDIBP52566 201 aa9.28□□□□□ -0.92
CACNA1C-220ENST00000399655 RSPH10B2B2RC85 870 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 RSPH10BP0C881 870 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 XRCC5P13010 732 aaKnown RBP9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 PSMC3P17980 439 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 SGO2Q562F6 1265 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 URB1O60287 2271 aaKnown RBP9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 RAB3GAP2Q9H2M9 1393 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 TAC1P20366 129 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 JAK1P23458 1154 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 DHX34Q14147 1143 aaKnown RBP9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 MTERF2Q49AM1 385 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 MIGA1Q8NAN2 632 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 HSPH1Q92598 858 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 MCRS1Q96EZ8 462 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 AMFRQ9UKV5 643 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 STAM2O75886 525 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 LRPAP1P30533 357 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 CCT8P50990 548 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 PARP3Q9Y6F1 533 aa9.27□□□□□ -0.92
CACNA1C-220ENST00000399655 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PRKCQQ04759 706 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 LRRC39Q96DD0 335 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 MAPK13O15264 365 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 ANKRD42Q8N9B4 389 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 MAML3Q96JK9 1138 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM129AQ9BZQ8 928 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 GNGT1P63211 74 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PDE1BQ01064 536 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 CYTH2Q99418 400 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 APOA4P06727 396 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 CEP95Q96GE4 821 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 BPIFB4P59827 614 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF544Q6NX49 715 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 NUDCD1Q96RS6 583 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 HNMTP50135 292 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PLCD1P51178 756 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 TBL3Q12788 808 aaKnown RBP9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 DRP2Q13474 957 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 KIF22Q14807 665 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 TUBGCP2Q9BSJ2 902 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 KRT84Q9NSB2 600 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 SNPHO15079 494 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 TATP17735 454 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PPP1R14AQ96A00 147 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 DYDC2Q96IM9 177 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 SMYD2Q9NRG4 433 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 LZTS1Q9Y250 596 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 GCLCP48506 637 aaPredicted RBP9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF75DP51815 510 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PLS1Q14651 629 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 NUP85Q9BW27 656 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 PKD2L1Q9P0L9 805 aa9.27□□□□□ -0.93
CACNA1C-220ENST00000399655 CFAP73A6NFT4 308 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 AXIN1O15169 862 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 FAM107AO95990 144 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 GUCY2CP25092 1073 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 AFMP43652 599 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 EIF3BP55884 814 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 KIRREL3Q8IZU9 778 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SLC26A7Q8TE54 656 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 UBN1Q9NPG3 1134 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ASXL3Q9C0F0 2248 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ADCY8P40145 1251 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CSTF3Q12996 717 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TNIP2Q8NFZ5 429 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 BCAS4Q8TDM0 211 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CRNKL1Q9BZJ0 848 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 XPO1O14980 1071 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ATF2P15336 505 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 PTPREP23469 700 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 SSTP61278 116 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 LRMPQ12912 555 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 ABRQ12979 859 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 RCN1Q15293 331 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 FRA10AC1Q70Z53 315 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 TRPV6Q9H1D0 765 aa9.26□□□□□ -0.93
CACNA1C-220ENST00000399655 CENPXA8MT69 81 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms