RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 TRIOO75962 3097 aa21.4■■□□□ 1.02
UFD1-202ENST00000399523 LINC01553A4QN01 128 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 GRXCR2A6NFK2 248 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 PDE4BQ07343 736 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 PPP2R5BQ15173 497 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 PTGISQ16647 500 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 PPP4R3BQ5MIZ7 849 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 PTCRAQ6ISU1 281 aaPredicted RBP21.39■■□□□ 1.01
UFD1-202ENST00000399523 CCDC155Q8N6L0 562 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 FBXL18Q96ME1 805 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 MTUS1Q9ULD2 1270 aa21.39■■□□□ 1.01
UFD1-202ENST00000399523 POTEB3A0JP26 581 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 PATL2C9JE40 543 aaKnown RBP21.38■■□□□ 1.01
UFD1-202ENST00000399523 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 RNF113AO15541 343 aaKnown RBP21.38■■□□□ 1.01
UFD1-202ENST00000399523 PARNO95453 639 aaKnown RBP21.38■■□□□ 1.01
UFD1-202ENST00000399523 CXCL10P02778 98 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 APPP05067 770 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 PUS10Q3MIT2 529 aaKnown RBP21.38■■□□□ 1.01
UFD1-202ENST00000399523 CNKSR3Q6P9H4 555 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 POTEBQ6S5H4 581 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 IFNL3Q8IZI9 196 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 SCFD2Q8WU76 684 aa21.38■■□□□ 1.01
UFD1-202ENST00000399523 RANBP17Q9H2T7 1088 aaKnown RBP21.38■■□□□ 1.01
UFD1-202ENST00000399523 ABHD14A-ACY1A0A1B0GW23 586 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 NFIBO00712 420 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 DCXO43602 365 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 SELPP16109 830 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 RBL2Q08999 1139 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 SESTD1Q86VW0 696 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 NEK9Q8TD19 979 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 COPS5Q92905 334 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 SNX27Q96L92 541 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 ZBTB40Q9NUA8 1239 aa21.37■■□□□ 1.01
UFD1-202ENST00000399523 ZFYP08048 801 aaPredicted RBP21.36■■□□□ 1.01
UFD1-202ENST00000399523 EDNRBP24530 442 aa21.36■■□□□ 1.01
UFD1-202ENST00000399523 LRRC8DQ7L1W4 858 aa21.36■■□□□ 1.01
UFD1-202ENST00000399523 RASGRP2Q7LDG7 609 aa21.36■■□□□ 1.01
UFD1-202ENST00000399523 STX8Q9UNK0 236 aa21.36■■□□□ 1.01
UFD1-202ENST00000399523 MYO7AQ13402 2215 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 PTPDC1A2A3K4 754 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 M0R2C6 588 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 NBNO60934 754 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 EFCAB14O75071 495 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 SLC3A2P08195 630 aaKnown RBP21.35■■□□□ 1.01
UFD1-202ENST00000399523 TCTN1Q2MV58 587 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 GDF6Q6KF10 455 aaPredicted RBP21.35■■□□□ 1.01
UFD1-202ENST00000399523 DHX38Q92620 1227 aaKnown RBP21.35■■□□□ 1.01
UFD1-202ENST00000399523 IL17RBQ9NRM6 502 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 ECHDC1Q9NTX5 307 aa21.35■■□□□ 1.01
UFD1-202ENST00000399523 TXNP10599 105 aaKnown RBP21.34■■□□□ 1.01
UFD1-202ENST00000399523 PPARAQ07869 468 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 PDE4DQ08499 809 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 BTNL9Q6UXG8 535 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 SLC30A10Q6XR72 485 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 CLEC4DQ8WXI8 215 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 NACAP1Q9BZK3 213 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 LRRCC1Q9C099 1032 aa21.34■■□□□ 1.01
UFD1-202ENST00000399523 CKBP12277 381 aa21.33■■□□□ 1.01
UFD1-202ENST00000399523 CALML3P27482 149 aa21.33■■□□□ 1.01
UFD1-202ENST00000399523 NOVP48745 357 aa21.33■■□□□ 1.01
UFD1-202ENST00000399523 DNERQ8NFT8 737 aa21.33■■□□□ 1.01
UFD1-202ENST00000399523 MRPL38Q96DV4 380 aaKnown RBP21.33■■□□□ 1.01
UFD1-202ENST00000399523 MPHOSPH6Q99547 160 aaKnown RBP21.33■■□□□ 1.01
UFD1-202ENST00000399523 ARIH2O95376 493 aa21.32■■□□□ 1
UFD1-202ENST00000399523 IKBKEQ14164 716 aa21.32■■□□□ 1
UFD1-202ENST00000399523 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
UFD1-202ENST00000399523 RNF207Q6ZRF8 634 aa21.32■■□□□ 1
UFD1-202ENST00000399523 FBXO22Q8NEZ5 403 aa21.32■■□□□ 1
UFD1-202ENST00000399523 DCAF4Q8WV16 495 aa21.32■■□□□ 1
UFD1-202ENST00000399523 C17orf80Q9BSJ5 609 aa21.32■■□□□ 1
UFD1-202ENST00000399523 CTNNA3Q9UI47 895 aa21.32■■□□□ 1
UFD1-202ENST00000399523 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.32■■□□□ 1
UFD1-202ENST00000399523 INSL6Q9Y581 213 aa21.32■■□□□ 1
UFD1-202ENST00000399523 C19orf67A6NJJ6 358 aa21.31■■□□□ 1
UFD1-202ENST00000399523 NMT2O60551 498 aa21.31■■□□□ 1
UFD1-202ENST00000399523 SLC16A2P36021 539 aa21.31■■□□□ 1
UFD1-202ENST00000399523 CHMP4BP1P59074 171 aa21.31■■□□□ 1
UFD1-202ENST00000399523 RPS6P62753 249 aaKnown RBP21.31■■□□□ 1
UFD1-202ENST00000399523 ZP2Q05996 745 aa21.31■■□□□ 1
UFD1-202ENST00000399523 COL19A1Q14993 1142 aa21.31■■□□□ 1
UFD1-202ENST00000399523 SYDE2Q5VT97 1194 aa21.31■■□□□ 1
UFD1-202ENST00000399523 CCDC62Q6P9F0 684 aa21.31■■□□□ 1
UFD1-202ENST00000399523 KAT2BQ92831 832 aa21.31■■□□□ 1
UFD1-202ENST00000399523 CRBNQ96SW2 442 aa21.31■■□□□ 1
UFD1-202ENST00000399523 PRKAG3Q9UGI9 489 aa21.31■■□□□ 1
UFD1-202ENST00000399523 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
UFD1-202ENST00000399523 C5orf42Q9H799 3197 aa21.31■■□□□ 1
UFD1-202ENST00000399523 MICAL3Q7RTP6 2002 aa21.3■■□□□ 1
UFD1-202ENST00000399523 TSPY2A6NKD2 308 aa21.3■■□□□ 1
UFD1-202ENST00000399523 H3BQ06 376 aaPredicted RBP21.3■■□□□ 1
UFD1-202ENST00000399523 SMARCA5O60264 1052 aaPredicted RBP21.3■■□□□ 1
UFD1-202ENST00000399523 MMP3P08254 477 aa21.3■■□□□ 1
UFD1-202ENST00000399523 MS4A1P11836 297 aa21.3■■□□□ 1
UFD1-202ENST00000399523 CCDC96Q2M329 555 aa21.3■■□□□ 1
UFD1-202ENST00000399523 FAM117BQ6P1L5 589 aa21.3■■□□□ 1
UFD1-202ENST00000399523 TRAF7Q6Q0C0 670 aa21.3■■□□□ 1
UFD1-202ENST00000399523 AFG1LQ8WV93 481 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms