RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 DAPK3O43293 454 aa16.34■□□□□ 0.21
ITSN1-210ENST00000399353 IGHMBP2P38935 993 aaKnown RBP16.34■□□□□ 0.21
ITSN1-210ENST00000399353 SLC1A4P43007 532 aa16.34■□□□□ 0.21
ITSN1-210ENST00000399353 RCSD1Q6JBY9 416 aa16.34■□□□□ 0.21
ITSN1-210ENST00000399353 MARCH10Q8NA82 808 aaPredicted RBP16.34■□□□□ 0.21
ITSN1-210ENST00000399353 DDX23Q9BUQ8 820 aaKnown RBP16.34■□□□□ 0.21
ITSN1-210ENST00000399353 TAF1DQ9H5J8 278 aaPredicted RBP16.34■□□□□ 0.21
ITSN1-210ENST00000399353 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
ITSN1-210ENST00000399353 PAPOLBQ9NRJ5 636 aaKnown RBP16.34■□□□□ 0.21
ITSN1-210ENST00000399353 hCG_2014768A0A024R1R8 64 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.21
ITSN1-210ENST00000399353 KRT13P13646 458 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 ERFP50548 548 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 ZNF658Q5TYW1 1059 aaPredicted RBP16.33■□□□□ 0.21
ITSN1-210ENST00000399353 PPP4R3AQ6IN85 833 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 RETREG2Q8NC44 543 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 ITIH6Q6UXX5 1313 aa16.33■□□□□ 0.21
ITSN1-210ENST00000399353 RGS16O15492 202 aaPredicted RBP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 KCNJ2P63252 427 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 YTHDF3Q7Z739 585 aaKnown RBP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 CATIPQ7Z7H3 387 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 C3orf20Q8ND61 904 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 RASGRP4Q8TDF6 673 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 WHAMMQ8TF30 809 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 NSRP1Q9H0G5 558 aaKnown RBP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 USH1CQ9Y6N9 552 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 IGF2BP3O00425 579 aaKnown RBP eCLIP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 SEMA3EO15041 775 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 FMNL1O95466 1100 aaPredicted RBP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 VSIG1Q86XK7 387 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 IQCKQ8N0W5 287 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 NKX2-3Q8TAU0 364 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 UIMC1Q96RL1 719 aa16.33■□□□□ 0.2
ITSN1-210ENST00000399353 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
ITSN1-210ENST00000399353 A8MUI8 341 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 SLC8A3P57103 927 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 USP4Q13107 963 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 ITGB3BPQ13352 177 aaPredicted RBP16.32■□□□□ 0.2
ITSN1-210ENST00000399353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.32■□□□□ 0.2
ITSN1-210ENST00000399353 ECT2Q9H8V3 914 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.2
ITSN1-210ENST00000399353 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 AMACRQ9UHK6 382 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 CDC37Q16543 378 aaPredicted RBP16.32■□□□□ 0.2
ITSN1-210ENST00000399353 ADAMTS1Q9UHI8 967 aa16.32■□□□□ 0.2
ITSN1-210ENST00000399353 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
ITSN1-210ENST00000399353 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
ITSN1-210ENST00000399353 LRRC53A6NM62 1247 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 CHN1P15882 459 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 LAMB3Q13751 1172 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 HLFQ16534 295 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 EARS2Q5JPH6 523 aaKnown RBP16.31■□□□□ 0.2
ITSN1-210ENST00000399353 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF513Q8N8E2 541 aaPredicted RBP16.31■□□□□ 0.2
ITSN1-210ENST00000399353 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 FERMT2Q96AC1 680 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 CCDC194A0A1B0GVG4 234 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 EPB41P11171 864 aaKnown RBP16.31■□□□□ 0.2
ITSN1-210ENST00000399353 IFNAR1P17181 557 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 CYP7A1P22680 504 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 GDAP1Q8TB36 358 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
ITSN1-210ENST00000399353 PRKAB2O43741 272 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 PAPOLAP51003 745 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 PLTPP55058 493 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 TRAF1Q13077 416 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 MUM1Q2TAK8 710 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 LRRC23Q53EV4 343 aaPredicted RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 LRRC34Q8IZ02 419 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 PSMD1Q99460 953 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 PRMT1Q99873 361 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 TRAPPC3O43617 180 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 PYGLP06737 847 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 NUGGCQ68CJ6 796 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 TEKT4Q8WW24 435 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 TMBIM4Q9HC24 238 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 CNOT8Q9UFF9 292 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 UBOX5O94941 541 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 IFIT1BQ5T764 474 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 NT5DC1Q5TFE4 455 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 RNF10Q8N5U6 811 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 XPO6Q96QU8 1125 aaKnown RBP16.3■□□□□ 0.2
ITSN1-210ENST00000399353 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
ITSN1-210ENST00000399353 XDHP47989 1333 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 ATP2A2P16615 1042 aaKnown RBP16.29■□□□□ 0.2
ITSN1-210ENST00000399353 RASIP1Q5U651 963 aa16.29■□□□□ 0.2
ITSN1-210ENST00000399353 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms