RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TTC4O95801 387 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CCDC14Q49A88 953 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 MUM1L1Q5H9M0 696 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 TMEM154Q6P9G4 183 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 LRGUKQ96M69 825 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 EFHD1Q9BUP0 239 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 RAB17Q9H0T7 212 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 ZMYM6O95789 1325 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
SMAD9-203ENST00000399275 SLFN14P0C7P3 912 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 HOXC9P31274 260 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 MORC3Q14149 939 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 NECTIN1Q15223 517 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 TTC38Q5R3I4 469 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 LGSNQ5TDP6 509 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 ALS2CLQ60I27 953 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 NOSTRINQ8IVI9 506 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 PARP2Q9UGN5 583 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CD2APQ9Y5K6 639 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 CARMIL3Q8ND23 1372 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
SMAD9-203ENST00000399275 H7C1D1 291 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 EYA2O00167 538 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 GNAT1P11488 350 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 DNM2P50570 870 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 ERMNQ8TAM6 284 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 ENOX1Q8TC92 643 aaKnown RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 PSD3Q9NYI0 1048 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 PRELID1Q9Y255 219 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SESN1Q9Y6P5 492 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 RAB14P61106 215 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 NAA30Q147X3 362 aaPredicted RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 C6orf50Q9HD87 102 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 GID8Q9NWU2 228 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 TMEM191CA6NGB0 347 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 B4E1Z4 1266 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 TMEM191BP0C7N4 346 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 HNRNPH1P31943 449 aaKnown RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 MLH1P40692 756 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CTCFP49711 727 aaPredicted RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 PDE4DQ08499 809 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 NNTQ13423 1086 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 BEND3Q5T5X7 828 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM63Q969Q1 353 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CAB39Q9Y376 341 aaPredicted RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 HDAC4P56524 1084 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 NONOQ15233 471 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 KRT79Q5XKE5 535 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SYCE1Q8N0S2 351 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 TTC16Q8NEE8 873 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 KIFC3Q9BVG8 833 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CFAP73A6NFT4 308 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 USP27XA6NNY8 438 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 FOSL2P15408 326 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CYP7A1P22680 504 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 SERPINB4P48594 390 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 NOP9Q86U38 636 aaKnown RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 PSMB7Q99436 277 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 MTRQ99707 1265 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 HAUS7Q99871 368 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 CNOT10Q9H9A5 744 aaKnown RBP10.43□□□□□ -0.74
SMAD9-203ENST00000399275 KRT82Q9NSB4 513 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 ZBTB21Q9ULJ3 1066 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
SMAD9-203ENST00000399275 GRK2P25098 689 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 SERPINB1P30740 379 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 GJC1P36383 396 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 IL9RQ01113 521 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 RCN2Q14257 317 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PROSER2Q86WR7 435 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 P3H4Q92791 437 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 EAF2Q96CJ1 260 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PCDHA5Q9Y5H7 936 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 BZW2Q9Y6E2 419 aaKnown RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 NR1D1P20393 614 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PAX7P23759 505 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 CASP14P31944 242 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 RPS6KA1Q15418 735 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PI4K2BQ8TCG2 481 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 TUBGCP3Q96CW5 907 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 KLHL25Q9H0H3 589 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ASIC3Q9UHC3 531 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ATP7BP35670 1465 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 GPAA1O43292 621 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ITIH3Q06033 890 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms