RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ZSCAN26Q16670 478 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 ZNF804AQ7Z570 1209 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 NEDD1Q8NHV4 660 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 HPS3Q969F9 1004 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 RPGRIP1Q96KN7 1286 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 CAPZA3Q96KX2 299 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 GPR101Q96P66 508 aaPredicted RBP28.51■■■□□ 2.15
COL13A1-203ENST00000398969 CRAMP1Q96RY5 1269 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 SEMA6BQ9H3T3 888 aa28.51■■■□□ 2.15
COL13A1-203ENST00000398969 DDX60LQ5H9U9 1706 aaKnown RBP28.51■■■□□ 2.15
COL13A1-203ENST00000398969 SOGA3Q5TF21 947 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 SEC63Q9UGP8 760 aaKnown RBP28.5■■■□□ 2.15
COL13A1-203ENST00000398969 ANO9A1A5B4 782 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 FKBP15Q5T1M5 1219 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 POTEDQ86YR6 584 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 FAM71BQ8TC56 605 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 CALML4Q96GE6 196 aa28.5■■■□□ 2.15
COL13A1-203ENST00000398969 CDK5RAP2Q96SN8 1893 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 UFL1O94874 794 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 ATP2B4P23634 1241 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 BTDP43251 543 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 CYP27A1Q02318 531 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 ORC2Q13416 577 aaPredicted RBP28.49■■■□□ 2.15
COL13A1-203ENST00000398969 CCDC102AQ96A19 550 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 PIGSQ96S52 555 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 DUSP10Q9Y6W6 482 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 MCM3P25205 808 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 VAV2P52735 878 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 HSP90B2PQ58FF3 399 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 GOLGA5Q8TBA6 731 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 ACBD3Q9H3P7 528 aa28.49■■■□□ 2.15
COL13A1-203ENST00000398969 TARSL2A2RTX5 802 aaKnown RBP28.48■■■□□ 2.15
COL13A1-203ENST00000398969 TULP2O00295 520 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 SMARCA1P28370 1054 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 CENPPQ6IPU0 288 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 REXO1Q8N1G1 1221 aaKnown RBP28.48■■■□□ 2.15
COL13A1-203ENST00000398969 VAT1LQ9HCJ6 419 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 SLC39A2Q9NP94 309 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 BIN2Q9UBW5 565 aaPredicted RBP28.48■■■□□ 2.15
COL13A1-203ENST00000398969 GGA1Q9UJY5 639 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 IQCDQ96DY2 449 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 VIPAS39Q9H9C1 493 aa28.48■■■□□ 2.15
COL13A1-203ENST00000398969 ZNF263O14978 683 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 KIF5AQ12840 1032 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 GRB10Q13322 594 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 SV2BQ7L1I2 683 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 CERS3Q8IU89 383 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 MED4Q9NPJ6 270 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 BLOC1S4Q9NUP1 217 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 TMEM260Q9NX78 707 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 PODXL2Q9NZ53 605 aa28.47■■■□□ 2.15
COL13A1-203ENST00000398969 MACROD2A1Z1Q3 448 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 HNRNPH3P31942 346 aaKnown RBP28.46■■■□□ 2.15
COL13A1-203ENST00000398969 TXKP42681 527 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 FLAD1Q8NFF5 587 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 CEP95Q96GE4 821 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 MTMR9Q96QG7 549 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 TSGA10Q9BZW7 698 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 ESYT2A0FGR8 921 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 IDEP14735 1019 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 TEX11Q8IYF3 940 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 SECISBP2LQ93073 1101 aaKnown RBP28.46■■■□□ 2.15
COL13A1-203ENST00000398969 CCDC42Q96M95 316 aa28.46■■■□□ 2.15
COL13A1-203ENST00000398969 GPR75-ASB3A0A0A6YYF3 556 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 ZNF185O15231 689 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 PLEKP08567 350 aaPredicted RBP28.45■■■□□ 2.15
COL13A1-203ENST00000398969 ACTN2P35609 894 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 RAD51AP2Q09MP3 1159 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 MAP9Q49MG5 647 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 VWA3BQ502W6 1294 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 LRWD1Q9UFC0 647 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 PLAGL2Q9UPG8 496 aa28.45■■■□□ 2.15
COL13A1-203ENST00000398969 MYMKA6NI61 221 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 PDE2AO00408 941 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-203ENST00000398969 SPA17Q15506 151 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 CAGE1Q8TC20 777 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 PNMA5Q96PV4 448 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 CD209Q9NNX6 404 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 STK17AQ9UEE5 414 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 SIK3Q9Y2K2 1263 aa28.45■■■□□ 2.14
COL13A1-203ENST00000398969 IRX5P78411 483 aaPredicted RBP28.44■■■□□ 2.14
COL13A1-203ENST00000398969 UNC13DQ70J99 1090 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 KRT26Q7Z3Y9 468 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 UBA5Q9GZZ9 404 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 ANKRD31Q8N7Z5 1873 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 USP17L5A8MUK1 530 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 AARSP49588 968 aaKnown RBP eCLIP28.44■■■□□ 2.14
COL13A1-203ENST00000398969 CALCRLQ16602 461 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 NDST4Q9H3R1 872 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 POLLQ9UGP5 575 aa28.44■■■□□ 2.14
COL13A1-203ENST00000398969 PVALEFA0A1B0GWK0 134 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 EPHB6O15197 1021 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 PHACTR2O75167 634 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 NOVP48745 357 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 FXR2P51116 673 aaKnown RBP eCLIP28.43■■■□□ 2.14
COL13A1-203ENST00000398969 TBC1D16Q8TBP0 767 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 RIOX1Q9H6W3 641 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 JADE2Q9NQC1 790 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 ARHGAP20Q9P2F6 1191 aa28.43■■■□□ 2.14
COL13A1-203ENST00000398969 CAPN2P17655 700 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms