RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 STOX1Q6ZVD7 989 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 WDR11Q9BZH6 1224 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 MAD2L2Q9UI95 211 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 TBX21Q9UL17 535 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 TAF6LQ9Y6J9 622 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 XIRP2A4UGR9 3374 aa15.61■□□□□ 0.09
VCX3A-202ENST00000398729 PALM3A6NDB9 673 aaPredicted RBP15.6■□□□□ 0.09
VCX3A-202ENST00000398729 ARVCFO00192 962 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 TNFRSF10AO00220 468 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 CABYRO75952 493 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 COL9A1P20849 921 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 EDNRBP24530 442 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 GRM4Q14833 912 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 BMP2KLQ5H9B9 411 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 TMEM67Q5HYA8 995 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 TMEM240Q5SV17 173 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 MFSD5Q6N075 450 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 CHST3Q7LGC8 479 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 ESYT1Q9BSJ8 1104 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 AMNQ9BXJ7 453 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 RAPGEFL1Q9UHV5 662 aa15.6■□□□□ 0.09
VCX3A-202ENST00000398729 RBM47A0AV96 593 aaKnown RBP15.59■□□□□ 0.09
VCX3A-202ENST00000398729 ZBTB5O15062 677 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 PTGS1P23219 599 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 TMEM63BQ5T3F8 832 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 CXCL17Q6UXB2 119 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 CATIPQ7Z7H3 387 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 MB21D2Q8IYB1 491 aaPredicted RBP15.59■□□□□ 0.09
VCX3A-202ENST00000398729 TBC1D5Q92609 795 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 MTMR8Q96EF0 704 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 PBX4Q9BYU1 374 aa15.59■□□□□ 0.09
VCX3A-202ENST00000398729 LSG1Q9H089 658 aaKnown RBP15.59■□□□□ 0.09
VCX3A-202ENST00000398729 NKRFO15226 690 aaKnown RBP eCLIP15.58■□□□□ 0.08
VCX3A-202ENST00000398729 TLR3O15455 904 aaKnown RBP15.58■□□□□ 0.08
VCX3A-202ENST00000398729 ANTXR2P58335 489 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 TRAF1Q13077 416 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 ADGRE1Q14246 886 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 PPP2R5BQ15173 497 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 CASC1Q6TDU7 716 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 SYTL5Q8TDW5 730 aaPredicted RBP15.58■□□□□ 0.08
VCX3A-202ENST00000398729 IGDCC4Q8TDY8 1250 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 NSUN6Q8TEA1 469 aaKnown RBP15.58■□□□□ 0.08
VCX3A-202ENST00000398729 SCFD2Q8WU76 684 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 PPM1EQ8WY54 764 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 SENP2Q9HC62 589 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 ANO2Q9NQ90 1003 aa15.58■□□□□ 0.08
VCX3A-202ENST00000398729 CFBP00751 764 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 CSF2RAP15509 400 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 CPT1AP50416 773 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 TROAPQ12815 778 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 ITGA7Q13683 1181 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 BRDTQ58F21 947 aaPredicted RBP15.57■□□□□ 0.08
VCX3A-202ENST00000398729 ZNF365Q70YC5 407 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 FAM126BQ8IXS8 530 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 TAAR1Q96RJ0 339 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 IWS1Q96ST2 819 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 RMDN3Q96TC7 470 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 MTA3Q9BTC8 594 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 SEZ6LQ9BYH1 1024 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 PRDM12Q9H4Q4 367 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 RIOX1Q9H6W3 641 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 COL20A1Q9P218 1284 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 PCDHA1Q9Y5I3 950 aa15.57■□□□□ 0.08
VCX3A-202ENST00000398729 SLC27A2O14975 620 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 ACRP10323 421 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 TXNP10599 105 aaKnown RBP15.56■□□□□ 0.08
VCX3A-202ENST00000398729 MCM5P33992 734 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 TTLL4Q14679 1199 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 NECTIN1Q15223 517 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 ARHGEF16Q5VV41 709 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 SAMD3Q8N6K7 520 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 SLC43A3Q8NBI5 491 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 OR6J1Q8NGC5 347 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 ATXN2LQ8WWM7 1075 aaKnown RBP15.56■□□□□ 0.08
VCX3A-202ENST00000398729 POLR3EQ9NVU0 708 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 MAP3K20Q9NYL2 800 aaKnown RBP15.56■□□□□ 0.08
VCX3A-202ENST00000398729 TRANK1O15050 2925 aa15.56■□□□□ 0.08
VCX3A-202ENST00000398729 PRC1O43663 620 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 PPP1R11O60927 126 aaPredicted RBP15.55■□□□□ 0.08
VCX3A-202ENST00000398729 KIF5BP33176 963 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 HSD17B4P51659 736 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 PPIGQ13427 754 aaKnown RBP eCLIP15.55■□□□□ 0.08
VCX3A-202ENST00000398729 STXBP2Q15833 593 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 CREB3L3Q68CJ9 461 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 CTCFLQ8NI51 663 aaPredicted RBP15.55■□□□□ 0.08
VCX3A-202ENST00000398729 CCDC136Q96JN2 1154 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 TMEM87BQ96K49 555 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 ASB2Q96Q27 587 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 PIGSQ96S52 555 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 LY9Q9HBG7 655 aa15.55■□□□□ 0.08
VCX3A-202ENST00000398729 GPHNQ9NQX3 736 aaPredicted RBP15.55■□□□□ 0.08
VCX3A-202ENST00000398729 GRIN2DO15399 1336 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 PNMA6FA0A0J9YX94 578 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 OPLAHO14841 1288 aa15.54■□□□□ 0.08
VCX3A-202ENST00000398729 CYTH3O43739 400 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms