RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 STK3Q13188 491 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 PRR5LQ6MZQ0 368 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 PIF1Q9H611 641 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 FAM53CQ9NYF3 392 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 A0A0B4J203 849 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 TBKBP1A7MCY6 615 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 AP5Z1O43299 807 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 GNAT2P19087 354 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 CTAG1AP78358 180 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
MSL3-207ENST00000398527 IFIT5Q13325 482 aaKnown RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 NEDD9Q14511 834 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 SYCP1Q15431 976 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 HLFQ16534 295 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 IMMTQ16891 758 aaKnown RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 SPDYCQ5MJ68 293 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 BICDL1Q6ZP65 573 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 GPC2Q8N158 579 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 LILRB1Q8NHL6 650 aaPredicted RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 BICD2Q8TD16 824 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 N4BP2L2Q92802 583 aaPredicted RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 FAM89AQ96GI7 184 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 PUS3Q9BZE2 481 aaKnown RBP11.97□□□□□ -0.49
MSL3-207ENST00000398527 ABCG4Q9H172 646 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 VPS33BQ9H267 617 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
MSL3-207ENST00000398527 NEMFO60524 1076 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 SEPT7Q16181 437 aaKnown RBP11.96□□□□□ -0.49
MSL3-207ENST00000398527 MUM1Q2TAK8 710 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 HOOK3Q86VS8 718 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 FLCNQ8NFG4 579 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 ENGASEQ8NFI3 743 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 FAM81AQ8TBF8 368 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 C7orf43Q8WVR3 580 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 HHIPL1Q96JK4 782 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 A1CFQ9NQ94 594 aaKnown RBP11.96□□□□□ -0.49
MSL3-207ENST00000398527 CLIC5Q9NZA1 410 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 PCSK1NQ9UHG2 260 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.49
MSL3-207ENST00000398527 FZD9O00144 591 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 RTN2O75298 545 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 NR1I2O75469 434 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 YEATS4O95619 227 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 CCNCP24863 283 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 USP8P40818 1118 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 RASA2Q15283 850 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 STX1AQ16623 288 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 ANO6Q4KMQ2 910 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 CIAPIN1Q6FI81 312 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 GBP6Q6ZN66 633 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 BRAPQ7Z569 592 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 MB21D2Q8IYB1 491 aaPredicted RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 EXOC4Q96A65 974 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 ASIC4Q96FT7 647 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 SLC39A13Q96H72 371 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 ZNF277Q9NRM2 450 aaPredicted RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 ZNHIT6Q9NWK9 470 aaKnown RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 LZTS1Q9Y250 596 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 SSX2IPQ9Y2D8 614 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 GOLGA6L19H0YKK7 550 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 M0R2C6 588 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 TRAF5O00463 557 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 CTIFO43310 598 aaKnown RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 SRGNP10124 158 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 HOXD11P31277 338 aaPredicted RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 ZNF75DP51815 510 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 ITIH3Q06033 890 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 HABP4Q5JVS0 413 aaKnown RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 CCSAPQ6IQ19 270 aaPredicted RBP11.95□□□□□ -0.5
MSL3-207ENST00000398527 UNC5DQ6UXZ4 953 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 BRSK2Q8IWQ3 736 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 CHPFQ8IZ52 775 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 WDR66Q8TBY9 1149 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 OSBP2Q969R2 916 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 SLC35B4Q969S0 331 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.95□□□□□ -0.54e-7■■■■□ 21.7
MSL3-207ENST00000398527 CHST12Q9NRB3 414 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 KIAA1468Q9P260 1216 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 POLG2Q9UHN1 485 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
MSL3-207ENST00000398527 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 OPA1O60313 960 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 FOXD2O60548 495 aaPredicted RBP11.94□□□□□ -0.5
MSL3-207ENST00000398527 COL6A1P12109 1028 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 RPL13P26373 211 aaKnown RBP11.94□□□□□ -0.5
MSL3-207ENST00000398527 GCKP35557 465 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 ZNF165P49910 485 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 CTSWP56202 376 aa11.94□□□□□ -0.5
MSL3-207ENST00000398527 APOBRQ0VD83 1088 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms