RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 IRX5P78411 483 aaPredicted RBP18.17■□□□□ 0.5
MBD1-207ENST00000398488 TRAF1Q13077 416 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 DNERQ8NFT8 737 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 CRISPLD2Q9H0B8 497 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 PSTPIP2Q9H939 334 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
MBD1-207ENST00000398488 ADD3Q9UEY8 706 aaKnown RBP18.17■□□□□ 0.5
MBD1-207ENST00000398488 SEPT4O43236 478 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 JAK2O60674 1132 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 MNX1P50219 401 aaPredicted RBP18.16■□□□□ 0.5
MBD1-207ENST00000398488 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
MBD1-207ENST00000398488 MAF1Q9H063 256 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 VPS54Q9P1Q0 977 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
MBD1-207ENST00000398488 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
MBD1-207ENST00000398488 SMCO2A6NFE2 343 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 PIK3CDO00329 1044 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 ADCYAP1R1P41586 468 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
MBD1-207ENST00000398488 NSUN6Q8TEA1 469 aaKnown RBP18.15■□□□□ 0.5
MBD1-207ENST00000398488 PGBD1Q96JS3 809 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 PDCD2LQ9BRP1 358 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 ABHD16BQ9H3Z7 469 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 TMEM260Q9NX78 707 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
MBD1-207ENST00000398488 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
MBD1-207ENST00000398488 GJC2Q5T442 439 aaPredicted RBP18.14■□□□□ 0.49
MBD1-207ENST00000398488 ARHGEF16Q5VV41 709 aa18.14■□□□□ 0.49
MBD1-207ENST00000398488 SAMD3Q8N6K7 520 aa18.14■□□□□ 0.49
MBD1-207ENST00000398488 RIC8AQ9NPQ8 531 aa18.14■□□□□ 0.49
MBD1-207ENST00000398488 FRMPD3Q5JV73 1810 aa18.14■□□□□ 0.49
MBD1-207ENST00000398488 MKI67P46013 3256 aaKnown RBP18.14■□□□□ 0.49
MBD1-207ENST00000398488 RGS20O76081 388 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 NR3C2P08235 984 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 AKAP17AQ02040 695 aaKnown RBP18.13■□□□□ 0.49
MBD1-207ENST00000398488 PDE4DQ08499 809 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 PGM5Q15124 567 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 PPP1R18Q6NYC8 613 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 SMARCC2Q8TAQ2 1214 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 OGDHLQ9ULD0 1010 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 FRMPD4Q14CM0 1322 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 DEXIO95424 95 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 TFRCP02786 760 aaKnown RBP18.13■□□□□ 0.49
MBD1-207ENST00000398488 CLK2P49760 499 aaKnown RBP18.13■□□□□ 0.49
MBD1-207ENST00000398488 ADCY7P51828 1080 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 TRIM22Q8IYM9 498 aa18.13■□□□□ 0.49
MBD1-207ENST00000398488 ZNF713Q8N859 430 aaPredicted RBP18.13■□□□□ 0.49
MBD1-207ENST00000398488 DIS3LQ8TF46 1054 aaKnown RBP18.13■□□□□ 0.49
MBD1-207ENST00000398488 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 ARIH2O95376 493 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 MYCLP12524 364 aaPredicted RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 SMPD1P17405 629 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 MRPS9P82933 396 aaKnown RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 NPY5RQ15761 445 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 CPLX2Q6PUV4 134 aaKnown RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 VSIG10LQ86VR7 867 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 CUL5Q93034 780 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 IWS1Q96ST2 819 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 ZMYND12Q9H0C1 365 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 VTA1Q9NP79 307 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 RBM27Q9P2N5 1060 aaKnown RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 ORC3Q9UBD5 711 aaPredicted RBP18.12■□□□□ 0.49
MBD1-207ENST00000398488 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 PCDHA6Q9UN73 950 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 PCDHA8Q9Y5H6 950 aa18.12■□□□□ 0.49
MBD1-207ENST00000398488 STK36Q9NRP7 1315 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 RBM47A0AV96 593 aaKnown RBP18.11■□□□□ 0.49
MBD1-207ENST00000398488 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 MYADML2A6NDP7 307 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 PGK1P00558 417 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 AKR1A1P14550 325 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 JAKMIP3Q5VZ66 844 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 UBE2Q1Q7Z7E8 422 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 COPS5Q92905 334 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 ZSCAN31Q96LW9 406 aaPredicted RBP18.11■□□□□ 0.49
MBD1-207ENST00000398488 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
MBD1-207ENST00000398488 CTAGE5O15320 804 aa18.1■□□□□ 0.49
MBD1-207ENST00000398488 ST18O60284 1047 aa18.1■□□□□ 0.49
MBD1-207ENST00000398488 CDKL5O76039 1030 aa18.1■□□□□ 0.49
MBD1-207ENST00000398488 MRPL12P52815 198 aaKnown RBP18.1■□□□□ 0.49
MBD1-207ENST00000398488 TMX3Q96JJ7 454 aa18.1■□□□□ 0.49
MBD1-207ENST00000398488 GNEQ9Y223 722 aaKnown RBP18.1■□□□□ 0.49
MBD1-207ENST00000398488 ADAMTS4O75173 837 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 TNFAIP2Q03169 654 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 STXBP2Q15833 593 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 SEPT14Q6ZU15 432 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 WDR11Q9BZH6 1224 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 RTEL1Q9NZ71 1219 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 SYNRGQ9UMZ2 1314 aa18.09■□□□□ 0.49
MBD1-207ENST00000398488 EDIL3O43854 480 aa18.08■□□□□ 0.49
MBD1-207ENST00000398488 EIF3JO75822 258 aaKnown RBP18.08■□□□□ 0.49
MBD1-207ENST00000398488 RGS19P49795 217 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms