RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ZBTB5O15062 677 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 SMARCA1P28370 1054 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 FUT2Q10981 343 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 ME3Q16798 604 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 CCDC144BQ3MJ40 725 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 USH1GQ495M9 461 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 RNF180Q86T96 592 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 RRP36Q96EU6 259 aaKnown RBP29.39■■■□□ 2.3
U2AF1-203ENST00000398137 UBE2OQ9C0C9 1292 aaKnown RBP29.39■■■□□ 2.3
U2AF1-203ENST00000398137 LIMCH1Q9UPQ0 1083 aa29.39■■■□□ 2.3
U2AF1-203ENST00000398137 A0A1W2PQ45 241 aaPredicted RBP29.38■■■□□ 2.29
U2AF1-203ENST00000398137 A0A1W2PQY0 241 aa29.38■■■□□ 2.29
U2AF1-203ENST00000398137 hCG_1642624A0A1W2PR95 340 aa29.38■■■□□ 2.29
U2AF1-203ENST00000398137 PFKFB2O60825 505 aa29.38■■■□□ 2.29
U2AF1-203ENST00000398137 PPP1R11O60927 126 aaPredicted RBP29.38■■■□□ 2.29
U2AF1-203ENST00000398137 DUSP11O75319 330 aaKnown RBP29.38■■■□□ 2.29
U2AF1-203ENST00000398137 TDHQ8IZJ6 230 aa29.38■■■□□ 2.29
U2AF1-203ENST00000398137 CD2BP2O95400 341 aaKnown RBP29.37■■■□□ 2.29
U2AF1-203ENST00000398137 SCRN1Q12765 414 aa29.37■■■□□ 2.29
U2AF1-203ENST00000398137 SH3RF1Q7Z6J0 888 aa29.37■■■□□ 2.29
U2AF1-203ENST00000398137 FBXO11Q86XK2 927 aa29.37■■■□□ 2.29
U2AF1-203ENST00000398137 NECAB1Q8N987 351 aa29.37■■■□□ 2.29
U2AF1-203ENST00000398137 SEC63Q9UGP8 760 aaKnown RBP29.37■■■□□ 2.29
U2AF1-203ENST00000398137 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.36■■■□□ 2.29
U2AF1-203ENST00000398137 NFIBO00712 420 aa29.36■■■□□ 2.29
U2AF1-203ENST00000398137 CTAGE5O15320 804 aa29.36■■■□□ 2.29
U2AF1-203ENST00000398137 UPF3AQ9H1J1 476 aaKnown RBP29.36■■■□□ 2.29
U2AF1-203ENST00000398137 PDLIM7Q9NR12 457 aa29.36■■■□□ 2.29
U2AF1-203ENST00000398137 PNMA2Q9UL42 364 aa29.36■■■□□ 2.29
U2AF1-203ENST00000398137 MYH6P13533 1939 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 PNMA6FA0A0J9YX94 578 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 CPLX1O14810 134 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 PPFIA3O75145 1194 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 ACLYP53396 1101 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 CLEC4DQ8WXI8 215 aa29.35■■■□□ 2.29
U2AF1-203ENST00000398137 TSEN34Q9BSV6 310 aaKnown RBP29.35■■■□□ 2.29
U2AF1-203ENST00000398137 TRIM43BA6NCK2 446 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 PTGS1P23219 599 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 CST5P28325 142 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-203ENST00000398137 TLE2Q04725 743 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 NTRK3Q16288 839 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 KCNA10Q16322 511 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 LRIT3Q3SXY7 679 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 NSMFQ6X4W1 530 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 PHKBQ93100 1093 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 GTF3C6Q969F1 213 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 TRIM43Q96BQ3 446 aaPredicted RBP29.34■■■□□ 2.29
U2AF1-203ENST00000398137 AMNQ9BXJ7 453 aa29.34■■■□□ 2.29
U2AF1-203ENST00000398137 GJA9P57773 515 aa29.33■■■□□ 2.29
U2AF1-203ENST00000398137 IL27Q8NEV9 243 aa29.33■■■□□ 2.29
U2AF1-203ENST00000398137 V9GY48 417 aaPredicted RBP29.33■■■□□ 2.29
U2AF1-203ENST00000398137 ABCB11O95342 1321 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 IFNAR1P17181 557 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 ITGB8P26012 769 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 NKX3-2P78367 333 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 BAATQ14032 418 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-203ENST00000398137 TMEM63BQ5T3F8 832 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 MORC4Q8TE76 937 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 SLC26A6Q9BXS9 759 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 PDGFCQ9NRA1 345 aa29.32■■■□□ 2.28
U2AF1-203ENST00000398137 GNEQ9Y223 722 aaKnown RBP29.32■■■□□ 2.28
U2AF1-203ENST00000398137 LAMA2P24043 3122 aaKnown RBP29.31■■■□□ 2.28
U2AF1-203ENST00000398137 ASB14A6NK59 587 aa29.31■■■□□ 2.28
U2AF1-203ENST00000398137 ST3GAL1Q11201 340 aa29.31■■■□□ 2.28
U2AF1-203ENST00000398137 TAPT1Q6NXT6 567 aa29.31■■■□□ 2.28
U2AF1-203ENST00000398137 CPLX2Q6PUV4 134 aaKnown RBP29.31■■■□□ 2.28
U2AF1-203ENST00000398137 ZSCAN31Q96LW9 406 aaPredicted RBP29.31■■■□□ 2.28
U2AF1-203ENST00000398137 PRDM5Q9NQX1 630 aaPredicted RBP29.31■■■□□ 2.28
U2AF1-203ENST00000398137 PCDHA1Q9Y5I3 950 aa29.31■■■□□ 2.28
U2AF1-203ENST00000398137 MOXD2PA6NHM9 499 aa29.3■■■□□ 2.28
U2AF1-203ENST00000398137 DTNBO60941 627 aa29.3■■■□□ 2.28
U2AF1-203ENST00000398137 C6orf222P0C671 652 aaPredicted RBP29.3■■■□□ 2.28
U2AF1-203ENST00000398137 SLC30A10Q6XR72 485 aa29.3■■■□□ 2.28
U2AF1-203ENST00000398137 GPKOWQ92917 476 aaPredicted RBP eCLIP29.3■■■□□ 2.28
U2AF1-203ENST00000398137 SH2B1Q9NRF2 756 aaPredicted RBP29.3■■■□□ 2.28
U2AF1-203ENST00000398137 HEATR3Q7Z4Q2 680 aa29.29■■■□□ 2.28
U2AF1-203ENST00000398137 CCDC83Q8IWF9 413 aa29.29■■■□□ 2.28
U2AF1-203ENST00000398137 FBXO16Q8IX29 292 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-203ENST00000398137 LBHD1Q9BQE6 289 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-203ENST00000398137 RNF26Q9BY78 433 aaPredicted RBP29.29■■■□□ 2.28
U2AF1-203ENST00000398137 STARD7Q9NQZ5 370 aa29.29■■■□□ 2.28
U2AF1-203ENST00000398137 PRKAG2Q9UGJ0 569 aa29.29■■■□□ 2.28
U2AF1-203ENST00000398137 CDKL5O76039 1030 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 ASGR1P07306 291 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 SMPD1P17405 629 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 MCM2P49736 904 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 AKAP17AQ02040 695 aaKnown RBP29.28■■■□□ 2.28
U2AF1-203ENST00000398137 TNFAIP2Q03169 654 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 EEPD1Q7L9B9 569 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 ANKRD33Q7Z3H0 272 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 TRIM22Q8IYM9 498 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 BADQ92934 168 aa29.28■■■□□ 2.28
U2AF1-203ENST00000398137 MRPL11Q9Y3B7 192 aaKnown RBP29.28■■■□□ 2.28
U2AF1-203ENST00000398137 PRPF3O43395 683 aaKnown RBP29.27■■■□□ 2.28
U2AF1-203ENST00000398137 CTDNEP1O95476 244 aa29.27■■■□□ 2.28
U2AF1-203ENST00000398137 ALDH5A1P51649 535 aaPredicted RBP29.27■■■□□ 2.28
U2AF1-203ENST00000398137 SSRP1Q08945 709 aaKnown RBP29.27■■■□□ 2.28
U2AF1-203ENST00000398137 TRAF1Q13077 416 aa29.27■■■□□ 2.28
U2AF1-203ENST00000398137 WWC2Q6AWC2 1192 aa29.27■■■□□ 2.28
U2AF1-203ENST00000398137 PQBP1O60828 265 aaKnown RBP29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms