RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ARMCX3Q9UH62 379 aaPredicted RBP17.02■□□□□ 0.32
LSS-202ENST00000397728 P4HA1P13674 534 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 GBP3Q9H0R5 595 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 NUB1Q9Y5A7 615 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 EPHX2P34913 555 aa17.02■□□□□ 0.31
LSS-202ENST00000397728 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.31
LSS-202ENST00000397728 GOLGA5Q8TBA6 731 aa17.02■□□□□ 0.31
LSS-202ENST00000397728 MTMR4Q9NYA4 1195 aa17.02■□□□□ 0.31
LSS-202ENST00000397728 CD2APQ9Y5K6 639 aa17.02■□□□□ 0.31
LSS-202ENST00000397728 TNNC2P02585 160 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 GRM4Q14833 912 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 SELENOOQ9BVL4 669 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 DNAI1Q9UI46 699 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 KAZALD1Q96I82 304 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 GPR75-ASB3A0A0A6YYF3 556 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 TOB2Q14106 344 aaPredicted RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 NLRC4Q9NPP4 1024 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 ABCB11O95342 1321 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 IGSF3O75054 1194 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 NDUFB10O96000 172 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 BCRP11274 1271 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 RAET1EQ8TD07 263 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 ADARB2Q9NS39 739 aaKnown RBP17.01■□□□□ 0.31
LSS-202ENST00000397728 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
LSS-202ENST00000397728 CCL15-CCL14A0A0B4J2E2 113 aa17■□□□□ 0.31
LSS-202ENST00000397728 CSPG5O95196 566 aa17■□□□□ 0.31
LSS-202ENST00000397728 FDX1P10109 184 aa17■□□□□ 0.31
LSS-202ENST00000397728 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
LSS-202ENST00000397728 CCL15Q16663 113 aa17■□□□□ 0.31
LSS-202ENST00000397728 LDHDQ86WU2 507 aa17■□□□□ 0.31
LSS-202ENST00000397728 CBX8Q9HC52 389 aa17■□□□□ 0.31
LSS-202ENST00000397728 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
LSS-202ENST00000397728 PARP2Q9UGN5 583 aa17■□□□□ 0.31
LSS-202ENST00000397728 CTTNQ14247 550 aaKnown RBP17■□□□□ 0.31
LSS-202ENST00000397728 ASIC2Q16515 512 aa17■□□□□ 0.31
LSS-202ENST00000397728 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
LSS-202ENST00000397728 LRFN2Q9ULH4 789 aa17■□□□□ 0.31
LSS-202ENST00000397728 MTA3Q9BTC8 594 aa17■□□□□ 0.31
LSS-202ENST00000397728 ST7Q9NRC1 585 aa17■□□□□ 0.31
LSS-202ENST00000397728 FAM170AA1A519 330 aa17■□□□□ 0.31
LSS-202ENST00000397728 C19orf81C9J6K1 198 aa17■□□□□ 0.31
LSS-202ENST00000397728 BMS1Q14692 1282 aaKnown RBP17■□□□□ 0.31
LSS-202ENST00000397728 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
LSS-202ENST00000397728 PSMD1Q99460 953 aa17■□□□□ 0.31
LSS-202ENST00000397728 POLR3EQ9NVU0 708 aa17■□□□□ 0.31
LSS-202ENST00000397728 PODXL2Q9NZ53 605 aa17■□□□□ 0.31
LSS-202ENST00000397728 ZSCAN20P17040 1043 aaPredicted RBP16.99■□□□□ 0.31
LSS-202ENST00000397728 ADAM9Q13443 819 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 CAMTA1Q9Y6Y1 1673 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 UQCRHP07919 91 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
LSS-202ENST00000397728 MFSD14CQ5VZR4 134 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 LRRC45Q96CN5 670 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 NLRP4Q96MN2 994 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 SRGAP2CP0DJJ0 459 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 RFX1P22670 979 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 CUL4AQ13619 759 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 LPAR1Q92633 364 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 SNX16P57768 344 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 MAP9Q49MG5 647 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 SBK1Q52WX2 424 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 GSTA5Q7RTV2 222 aa16.99■□□□□ 0.31
LSS-202ENST00000397728 SPOPO43791 374 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 GNA14O95837 355 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 BAG1Q99933 345 aaPredicted RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 TEX13BQ9BXU2 312 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 SH3GLB2Q9NR46 395 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 RRP9O43818 475 aaKnown RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 TTLL4Q14679 1199 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 WDR46O15213 610 aaKnown RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 PPP6R2O75170 966 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 CDC27P30260 824 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 SETQ01105 290 aaPredicted RBP16.98■□□□□ 0.31
LSS-202ENST00000397728 NFIAQ12857 509 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 LIN9Q5TKA1 542 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 SLC9C1Q4G0N8 1177 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 CCDC122Q5T0U0 273 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 DCUN1D2Q6PH85 259 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 EXOC8Q8IYI6 725 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 BHMT2Q9H2M3 363 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
LSS-202ENST00000397728 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
LSS-202ENST00000397728 TMCO3Q6UWJ1 677 aa16.97■□□□□ 0.31
LSS-202ENST00000397728 ZKSCAN4Q969J2 545 aaPredicted RBP16.97■□□□□ 0.31
LSS-202ENST00000397728 PARK7Q99497 189 aaKnown RBP16.97■□□□□ 0.31
LSS-202ENST00000397728 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
LSS-202ENST00000397728 PCDHA5Q9Y5H7 936 aa16.97■□□□□ 0.31
LSS-202ENST00000397728 XRCC6P12956 609 aaKnown RBP eCLIP16.97■□□□□ 0.316e-7■■■■□ 25.5
LSS-202ENST00000397728 MCM6Q14566 821 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms