RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 BACE1P56817 501 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 TAF1CQ15572 869 aaPredicted RBP9.21□□□□□ -0.94
PTPRD-204ENST00000397606 CCL15Q16663 113 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 SLC7A3Q8WY07 619 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 MMP19Q99542 508 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 PDGFDQ9GZP0 370 aaPredicted RBP9.21□□□□□ -0.94
PTPRD-204ENST00000397606 TMEM63CQ9P1W3 806 aa9.21□□□□□ -0.94
PTPRD-204ENST00000397606 AFDNP55196 1824 aaKnown RBP9.21□□□□□ -0.94
PTPRD-204ENST00000397606 SLFN14P0C7P3 912 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GUCY1A2P33402 732 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 UBXN1Q04323 297 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 SEC23AQ15436 765 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 CCDC84Q86UT8 332 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 FAM178BQ8IXR5 827 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 METTL13Q8N6R0 699 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 TMEM87AQ8NBN3 555 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GMCL1Q96IK5 515 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 TBC1D7Q9P0N9 293 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 UBE2Q2LH0YL09 131 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 KIF2AO00139 706 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 PTPREP23469 700 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 INPP5BP32019 993 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GTF2A2P52657 109 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 DCAF17Q5H9S7 520 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 FAM47CQ5HY64 1035 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 MYOCDQ8IZQ8 938 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GMCL1P1Q8NEA9 526 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 NEK11Q8NG66 645 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 GOLGA5Q8TBA6 731 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 JMJD4Q9H9V9 463 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 PANK4Q9NVE7 773 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 PALM3A6NDB9 673 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 SLC25A27O95847 323 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 HARSP12081 509 aaKnown RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 HOXD10P28358 340 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 JAK3P52333 1124 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 FBXL16Q8N461 479 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 SLC17A8Q8NDX2 589 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 ACER1Q8TDN7 264 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 PHF20Q9BVI0 1012 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 NOC4LQ9BVI4 516 aaKnown RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 NFE2L3Q9Y4A8 694 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 CNTNAP5Q8WYK1 1306 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 AKR1B10O60218 316 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 ZEB2O60315 1214 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 PPP2R5AQ15172 486 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 ZSCAN30Q86W11 494 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 ZNF579Q8NAF0 562 aaKnown RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 CHAMP1Q96JM3 812 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 TRIM6Q9C030 488 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-204ENST00000397606 RRAGCQ9HB90 399 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 TMEM260Q9NX78 707 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 HPS5Q9UPZ3 1129 aa9.2□□□□□ -0.94
PTPRD-204ENST00000397606 ASB14A6NK59 587 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 EXOC3O60645 756 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 RPN1P04843 607 aaKnown RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 NELFBQ8WX92 580 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 SUGCTQ9HAC7 445 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 IFNKQ9P0W0 207 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 FAM198AQ9UFP1 575 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 SEPT9Q9UHD8 586 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 MAD2L2Q9UI95 211 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ESYT2A0FGR8 921 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 KRT76Q01546 638 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 SREBF2Q12772 1141 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 DMP1Q13316 513 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 NEDD9Q14511 834 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 NELFCDQ8IXH7 590 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 RGS22Q8NE09 1264 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 TAF4BQ92750 862 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 PUF60Q9UHX1 559 aaKnown RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 CETN2P41208 172 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ECE1P42892 770 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 CCDC181Q5TID7 509 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ZC3H15Q8WU90 426 aaKnown RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ZSWIM4Q9H7M6 989 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 GAP43P17677 238 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 TBC1D8BQ0IIM8 1120 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 RETREG2Q8NC44 543 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 AGXT2Q9BYV1 514 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 ZFYVE28Q9HCC9 887 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 RGS17Q9UGC6 210 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-204ENST00000397606 SYNPO2Q9UMS6 1093 aa9.19□□□□□ -0.94
PTPRD-204ENST00000397606 WDR64B1ANS9 1081 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 KIF5CO60282 957 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 GNA14O95837 355 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 HOXA7P31268 230 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-204ENST00000397606 CYLC1P35663 651 aaPredicted RBP9.18□□□□□ -0.94
PTPRD-204ENST00000397606 BIRC3Q13489 604 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 HACE1Q8IYU2 909 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 CHST13Q8NET6 341 aa9.18□□□□□ -0.94
PTPRD-204ENST00000397606 NEK9Q8TD19 979 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms