RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 IQSEC1Q6DN90 963 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 PHKBQ93100 1093 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 SLC26A6Q9BXS9 759 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 SPC25Q9HBM1 224 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 PXMP2Q9NR77 195 aa29.2■■■□□ 2.26
TSPAN4-207ENST00000397411 hCG_1984214I3L0E3 225 aa29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 SSRP1Q08945 709 aaKnown RBP29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 GJC2Q5T442 439 aaPredicted RBP29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 WWC2Q6AWC2 1192 aa29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 TRIM22Q8IYM9 498 aa29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 ZNF713Q8N859 430 aaPredicted RBP29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 KATNBL1Q9H079 304 aa29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 PDGFCQ9NRA1 345 aa29.19■■■□□ 2.26
TSPAN4-207ENST00000397411 KBTBD13C9JR72 458 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 DUSP11O75319 330 aaKnown RBP29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 MYCLP12524 364 aaPredicted RBP29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 IFNAR1P17181 557 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 ADCYAP1R1P41586 468 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 USP17L6PQ6QN14 398 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 RNF180Q86T96 592 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 C11orf49Q9H6J7 331 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 TPCN1Q9ULQ1 816 aa29.18■■■□□ 2.26
TSPAN4-207ENST00000397411 FRMPD3Q5JV73 1810 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 PPFIA3O75145 1194 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 PGK1P00558 417 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 NR3C2P08235 984 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 SCG2P13521 617 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 EDNRBP24530 442 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 PFKFB3Q16875 520 aaPredicted RBP29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 TAPT1Q6NXT6 567 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 DIS3LQ8TF46 1054 aaKnown RBP29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 LENG1Q96BZ8 264 aaPredicted RBP29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 HTATIP2Q9BUP3 242 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 AP5M1Q9H0R1 490 aa29.17■■■□□ 2.26
TSPAN4-207ENST00000397411 PPP1R18Q6NYC8 613 aa29.16■■■□□ 2.26
TSPAN4-207ENST00000397411 RNF26Q9BY78 433 aaPredicted RBP29.16■■■□□ 2.26
TSPAN4-207ENST00000397411 WDR11Q9BZH6 1224 aa29.16■■■□□ 2.26
TSPAN4-207ENST00000397411 BARHL2Q9NY43 387 aa29.16■■■□□ 2.26
TSPAN4-207ENST00000397411 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 SMCO2A6NFE2 343 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 DNM1LO00429 736 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 CDKL5O76039 1030 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 RBM25P49756 843 aaKnown RBP29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 ADCY7P51828 1080 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 LRRC41Q15345 812 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 NTRK3Q16288 839 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 SEPT14Q6ZU15 432 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 CCDC12Q8WUD4 166 aaPredicted RBP29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 PDCD2LQ9BRP1 358 aa29.15■■■□□ 2.26
TSPAN4-207ENST00000397411 STXBP3O00186 592 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 PIK3CDO00329 1044 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 PFKFB2O60825 505 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 EIF3JO75822 258 aaKnown RBP29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 CCND2P30279 289 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 SCFD2Q8WU76 684 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 DPF3Q92784 378 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 GLT8D2Q9H1C3 349 aa29.14■■■□□ 2.26
TSPAN4-207ENST00000397411 SPDYE3A6NKU9 549 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 MEIS2O14770 477 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 DYNC1LI2O43237 492 aaPredicted RBP29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 C6orf222P0C671 652 aaPredicted RBP29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 SMPD1P17405 629 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 SCRN1Q12765 414 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 PGM5Q15124 567 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 UBE2Q1Q7Z7E8 422 aa29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 SENP6Q9GZR1 1112 aaPredicted RBP29.13■■■□□ 2.25
TSPAN4-207ENST00000397411 TTLL4Q14679 1199 aa29.12■■■□□ 2.25
TSPAN4-207ENST00000397411 UBE2SQ16763 222 aa29.12■■■□□ 2.25
TSPAN4-207ENST00000397411 EHMT1Q9H9B1 1298 aa29.12■■■□□ 2.25
TSPAN4-207ENST00000397411 RIC8AQ9NPQ8 531 aa29.12■■■□□ 2.25
TSPAN4-207ENST00000397411 SYNRGQ9UMZ2 1314 aa29.12■■■□□ 2.25
TSPAN4-207ENST00000397411 RBM47A0AV96 593 aaKnown RBP29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 TXNP10599 105 aaKnown RBP29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 MNX1P50219 401 aaPredicted RBP29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 PKN1Q16512 942 aa29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 DUSP28Q4G0W2 176 aa29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 TLK2Q86UE8 772 aa29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 VSIG10LQ86VR7 867 aa29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 C6orf50Q9HD87 102 aa29.11■■■□□ 2.25
TSPAN4-207ENST00000397411 ADCY6O43306 1168 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 GJA9P57773 515 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 GNASQ5JWF2 1037 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 TYW1BQ6NUM6 668 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 NECAB1Q8N987 351 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 LIMCH1Q9UPQ0 1083 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 Q9Y3F1 56 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 LRRC37A2A6NM11 1700 aa29.1■■■□□ 2.25
TSPAN4-207ENST00000397411 NKRFO15226 690 aaKnown RBP eCLIP29.09■■■□□ 2.251e-6■■■□□ 18.9
TSPAN4-207ENST00000397411 ADAMTS4O75173 837 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 DEXIO95424 95 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 RABEP1Q15276 862 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 ME3Q16798 604 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 PCSK9Q8NBP7 692 aaKnown RBP29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 CCDC148Q8NFR7 591 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 FERMT2Q96AC1 680 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 ZFP91Q96JP5 570 aaPredicted RBP29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 KIF2CQ99661 725 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 PCDHA6Q9UN73 950 aa29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 GNEQ9Y223 722 aaKnown RBP29.09■■■□□ 2.25
TSPAN4-207ENST00000397411 PCDHA8Q9Y5H6 950 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms