RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SCG2P13521 617 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 EIF2AK2P19525 551 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 MRPL12P52815 198 aaKnown RBP24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 PDE4DQ08499 809 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 TYW1BQ6NUM6 668 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 PPP1R18Q6NYC8 613 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 ZNF713Q8N859 430 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 CUL5Q93034 780 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 LENG1Q96BZ8 264 aaPredicted RBP24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 PSTPIP2Q9H939 334 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 VTA1Q9NP79 307 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 PXMP2Q9NR77 195 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 BARHL2Q9NY43 387 aa24.4■■□□□ 1.5
TSPAN4-206ENST00000397408 RABEP1Q15276 862 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 PKN1Q16512 942 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 ME3Q16798 604 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 CCDC144BQ3MJ40 725 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 USP17L6PQ6QN14 398 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 TRIM22Q8IYM9 498 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 SMARCC2Q8TAQ2 1214 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 FAM184BQ9ULE4 1060 aa24.39■■□□□ 1.5
TSPAN4-206ENST00000397408 MEIS2O14770 477 aa24.38■■□□□ 1.49
TSPAN4-206ENST00000397408 RARBP10826 455 aa24.38■■□□□ 1.49
TSPAN4-206ENST00000397408 CAPN2P17655 700 aa24.38■■□□□ 1.49
TSPAN4-206ENST00000397408 RGS19P49795 217 aa24.38■■□□□ 1.49
TSPAN4-206ENST00000397408 MKI67P46013 3256 aaKnown RBP24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 PIK3CDO00329 1044 aa24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 FARP2O94887 1054 aaPredicted RBP24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 SSRP1Q08945 709 aaKnown RBP24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 NECAB1Q8N987 351 aa24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 IWS1Q96ST2 819 aa24.37■■□□□ 1.49
TSPAN4-206ENST00000397408 CDKL5O76039 1030 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 ADCYAP1R1P41586 468 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 UBE2SQ16763 222 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 GTF3C6Q969F1 213 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 PDCD2LQ9BRP1 358 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 PDGFCQ9NRA1 345 aa24.36■■□□□ 1.49
TSPAN4-206ENST00000397408 ADCY6O43306 1168 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 ADCY7P51828 1080 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 TAPT1Q6NXT6 567 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 ANKLE1Q8NAG6 615 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 XPNPEP3Q9NQH7 507 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 LIMCH1Q9UPQ0 1083 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 NR3C2P08235 984 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 PGM5Q15124 567 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 IL31RAQ8NI17 732 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 DIS3LQ8TF46 1054 aaKnown RBP24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 RIC8AQ9NPQ8 531 aa24.35■■□□□ 1.49
TSPAN4-206ENST00000397408 FRMPD4Q14CM0 1322 aa24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 SMCO2A6NFE2 343 aa24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 MYCNP04198 464 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 TNFAIP2Q03169 654 aa24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 STXBP2Q15833 593 aa24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 CCDC12Q8WUD4 166 aaPredicted RBP24.34■■□□□ 1.49
TSPAN4-206ENST00000397408 DTNBO60941 627 aa24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 DUSP11O75319 330 aaKnown RBP24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 DEXIO95424 95 aa24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 PGK1P00558 417 aa24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 MYCLP12524 364 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 MNX1P50219 401 aaPredicted RBP24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 UBE2Q1Q7Z7E8 422 aa24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 VPS54Q9P1Q0 977 aa24.33■■□□□ 1.49
TSPAN4-206ENST00000397408 SYNRGQ9UMZ2 1314 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 ESYT2A0FGR8 921 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 SPDYE3A6NKU9 549 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 ST18O60284 1047 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 CTDNEP1O95476 244 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 SMPD1P17405 629 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 IQSEC1Q6DN90 963 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 ARRDC4Q8NCT1 418 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 CCDC148Q8NFR7 591 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 PAWRQ96IZ0 340 aaKnown RBP24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 GLT8D2Q9H1C3 349 aa24.32■■□□□ 1.48
TSPAN4-206ENST00000397408 STK36Q9NRP7 1315 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 EIF3JO75822 258 aaKnown RBP24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 CCND2P30279 289 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 ST3GAL1Q11201 340 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 LRRC41Q15345 812 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 GJC2Q5T442 439 aaPredicted RBP24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 VSIG10LQ86VR7 867 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 TEX2Q8IWB9 1127 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 SCFD2Q8WU76 684 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 AIFM3Q96NN9 605 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 WDR11Q9BZH6 1224 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 ZMYND12Q9H0C1 365 aa24.31■■□□□ 1.48
TSPAN4-206ENST00000397408 RBM47A0AV96 593 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 DNM1LO00429 736 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 ADAMTS4O75173 837 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 PTGS1P23219 599 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 TMEM63BQ5T3F8 832 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 SEPT14Q6ZU15 432 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 TLK2Q86UE8 772 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 C6orf50Q9HD87 102 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 PCDHA6Q9UN73 950 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 GNEQ9Y223 722 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 PCDHA8Q9Y5H6 950 aa24.3■■□□□ 1.48
TSPAN4-206ENST00000397408 KBTBD13C9JR72 458 aa24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 MLLT1Q03111 559 aaPredicted RBP24.29■■□□□ 1.48
TSPAN4-206ENST00000397408 DUSP28Q4G0W2 176 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms