RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ADAMTS3O15072 1205 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 SETQ01105 290 aaPredicted RBP21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 PDIA5Q14554 519 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 CALCRLQ16602 461 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 RNF207Q6ZRF8 634 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 SAPCD2Q86UD0 394 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 CCDC102AQ96A19 550 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 P2RX7Q99572 595 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 HPSEQ9Y251 543 aa21.56■■□□□ 1.04
TSPAN4-204ENST00000397404 CCL15-CCL14A0A0B4J2E2 113 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 KIF3CO14782 793 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 CCNA1P78396 465 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 CCL15Q16663 113 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 KANK3Q6NY19 840 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 NIPA1Q7RTP0 329 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 SHCBP1Q8NEM2 672 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 ENGASEQ8NFI3 743 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 FAM20AQ96MK3 541 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 SPATC1LQ9H0A9 340 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 NUP62CLQ9H1M0 184 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 DACT1Q9NYF0 836 aa21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 COL11A1P12107 1806 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-204ENST00000397404 RPTORQ8N122 1335 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 STAM2O75886 525 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 SYKP43405 635 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 FXR2P51116 673 aaKnown RBP eCLIP21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 RGMBQ6NW40 437 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 FMR1NBQ8N0W7 255 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 MTMR9Q96QG7 549 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 PARK7Q99497 189 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 TLL2Q9Y6L7 1015 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 MYH7BA7E2Y1 1941 aa21.54■■□□□ 1.04
TSPAN4-204ENST00000397404 LOC102724159A0A0B4J2E5 919 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 B4DLN1 442 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 NFIBO00712 420 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 HOXA13P31271 388 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 FMR1Q06787 632 aaKnown RBP eCLIP21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 SNW1Q13573 536 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 PWP2Q15269 919 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 SHC4Q6S5L8 630 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 DNERQ8NFT8 737 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 MROH8Q9H579 483 aa21.53■■□□□ 1.04
TSPAN4-204ENST00000397404 VWA3AA6NCI4 1184 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 BCRP11274 1271 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 PFKFB1P16118 471 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 ZNF76P36508 570 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 ZNF157P51786 506 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 ZNF445P59923 1031 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 RPS6P62753 249 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 FCHSD1Q86WN1 690 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 KCTD17Q8N5Z5 321 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 SYTL5Q8TDW5 730 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 MPHOSPH6Q99547 160 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 CSRNP2Q9H175 543 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 CLSTN2Q9H4D0 955 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 TMEM63CQ9P1W3 806 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 KCNH3Q9ULD8 1083 aa21.52■■□□□ 1.04
TSPAN4-204ENST00000397404 WNT7AO00755 349 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 MAFGO15525 162 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 MARCH6O60337 910 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 NR1I2O75469 434 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 LIG1P18858 919 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 PLS1Q14651 629 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 ZSCAN23Q3MJ62 389 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 PCNX4Q63HM2 1172 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 SMCR8Q8TEV9 937 aaPredicted RBP21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 KCNMB3Q9NPA1 279 aa21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.03
TSPAN4-204ENST00000397404 A0A1B0GVL5 298 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 TMEM88BA6NKF7 163 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 PDHXO00330 501 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 ZNF202O95125 648 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 NDUFA8P51970 172 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 SREBF2Q12772 1141 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 CEP55Q53EZ4 464 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 MUM1L1Q5H9M0 696 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 RASAL3Q86YV0 1011 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 REM2Q8IYK8 340 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 IGSF22Q8N9C0 903 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 BRI3BPQ8WY22 251 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 IWS1Q96ST2 819 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 CCSER1Q9C0I3 900 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 TNMDQ9H2S6 317 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 HOMER2Q9NSB8 354 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 CCDC39Q9UFE4 941 aa21.51■■□□□ 1.03
TSPAN4-204ENST00000397404 SMCHD1A6NHR9 2005 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 BTBD19C9JJ37 291 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 TDP2O95551 362 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 SLC10A3P09131 477 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 NSMFQ6X4W1 530 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 RBM43Q6ZSC3 357 aaKnown RBP21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 CLIC6Q96NY7 704 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 TMEM60Q9H2L4 133 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 CUEDC2Q9H467 287 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 GOLPH3LQ9H4A5 285 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 MAGEF1Q9HAY2 307 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 CYP39A1Q9NYL5 469 aa21.5■■□□□ 1.03
TSPAN4-204ENST00000397404 ADD3Q9UEY8 706 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms