RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 PHF24Q9UPV7 400 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 ATP11BQ9Y2G3 1177 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 NR2E3Q9Y5X4 410 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 CYP46A1Q9Y6A2 500 aa11.18□□□□□ -0.62
MCF2L-206ENST00000397021 V9GY48 417 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-206ENST00000397021 CNTNAP5Q8WYK1 1306 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 A0A1W2PQ45 241 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-206ENST00000397021 A0A1W2PQY0 241 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 CTAGE5O15320 804 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 ARIH2O95376 493 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 NR3C2P08235 984 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 RTP1P59025 263 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 CCT2P78371 535 aaKnown RBP11.17□□□□□ -0.62
MCF2L-206ENST00000397021 FUT2Q10981 343 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 TRAF1Q13077 416 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 TOB2Q14106 344 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-206ENST00000397021 STXBP2Q15833 593 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 GNASQ5JWF2 1037 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 CCSAPQ6IQ19 270 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-206ENST00000397021 IL31RAQ8NI17 732 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 UPF3AQ9H1J1 476 aaKnown RBP11.17□□□□□ -0.62
MCF2L-206ENST00000397021 SPC25Q9HBM1 224 aa11.17□□□□□ -0.62
MCF2L-206ENST00000397021 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 LOC102724159A0A0B4J2E5 919 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 B4DLN1 442 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 SORBS3O60504 671 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 ASGR1P07306 291 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 MRPL12P52815 198 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 GHRHRQ02643 423 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 STK3Q13188 491 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 PWP2Q15269 919 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 FSCN1Q16658 493 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 UBE2SQ16763 222 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 DUSP28Q4G0W2 176 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 CHRDL2Q6WN34 429 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 TSEN34Q9BSV6 310 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 AGXT2Q9BYV1 514 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 NCOA5Q9HCD5 579 aaKnown RBP11.16□□□□□ -0.62
MCF2L-206ENST00000397021 STARD7Q9NQZ5 370 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
MCF2L-206ENST00000397021 MEIS2O14770 477 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 DTNBO60941 627 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 CST5P28325 142 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PDIA3P30101 505 aaKnown RBP11.15□□□□□ -0.62
MCF2L-206ENST00000397021 NAPAP54920 295 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PGM5Q15124 567 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 CXCL17Q6UXB2 119 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PCSK9Q8NBP7 692 aaKnown RBP11.15□□□□□ -0.62
MCF2L-206ENST00000397021 SCFD2Q8WU76 684 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 CUL5Q93034 780 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PHKBQ93100 1093 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 IWS1Q96ST2 819 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 TM6SF1Q9BZW5 370 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 MAF1Q9H063 256 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PSTPIP2Q9H939 334 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PRDM5Q9NQX1 630 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-206ENST00000397021 RTEL1Q9NZ71 1219 aa11.15□□□□□ -0.62
MCF2L-206ENST00000397021 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-206ENST00000397021 PLXNA1Q9UIW2 1896 aa11.15□□□□□ -0.63
MCF2L-206ENST00000397021 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
MCF2L-206ENST00000397021 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
MCF2L-206ENST00000397021 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 STXBP3O00186 592 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 PQBP1O60828 265 aaKnown RBP11.14□□□□□ -0.63
MCF2L-206ENST00000397021 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
MCF2L-206ENST00000397021 MYL3P08590 195 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 PSMC6P62333 389 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 TLE2Q04725 743 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 TTLL4Q14679 1199 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 SNX17Q15036 470 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 C8orf34Q49A92 452 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 CCDC62Q6P9F0 684 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 FBXL16Q8N461 479 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 SAMD3Q8N6K7 520 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 MAP3K20Q9NYL2 800 aaKnown RBP11.14□□□□□ -0.63
MCF2L-206ENST00000397021 Q9Y3F1 56 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 MRVI1Q9Y6F6 885 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
MCF2L-206ENST00000397021 CCDC196A0A1B0GTZ2 297 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 RGS20O76081 388 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 CCND2P30279 289 aa11.13□□□□□ -0.63
MCF2L-206ENST00000397021 RCAN1P53805 252 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms