RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 LIG1P18858 919 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 LEO1Q8WVC0 666 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 CFAP45Q9UL16 551 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 ZNFX1Q9P2E3 1918 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 UQCRHLA0A096LP55 91 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 CCDC194A0A1B0GVG4 234 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 CFBP00751 764 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 UQCRHP07919 91 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 FAM110CQ1W6H9 321 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 Q3C1V9 767 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 NOM1Q5C9Z4 860 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 SHCBP1Q8NEM2 672 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 SPATA32Q96LK8 384 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 DDX19AQ9NUU7 478 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 TMEM260Q9NX78 707 aa16.87■□□□□ 0.29
TM9SF1-202ENST00000396854 FAM205CA6NFA0 338 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 ALDH1A1P00352 501 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 MAP2K2P36507 400 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 RILPL1Q5EBL4 403 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 RBM43Q6ZSC3 357 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 PIK3AP1Q6ZUJ8 805 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 ZNF396Q96N95 335 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-202ENST00000396854 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 TRAPPC10P48553 1259 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 CCNA1P78396 465 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 ANKRD13CQ8N6S4 541 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 AP5Z1O43299 807 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 TLR2O60603 784 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 TPM3P06753 285 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 BCRP11274 1271 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 ERCC3P19447 782 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 VEGFBP49765 207 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 HTRA3P83110 453 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 ANO3Q9BYT9 981 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 MROH8Q9H579 483 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 MGAMO43451 1857 aa16.85■□□□□ 0.29
TM9SF1-202ENST00000396854 ZNF236Q9UL36 1845 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 CA12O43570 354 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 TOB1P50616 345 aaPredicted RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 RPS6P62753 249 aaKnown RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 TYRO3Q06418 890 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 NCAPG2Q86XI2 1143 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 SPTLC3Q9NUV7 552 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 GOLGA6L4A6NEF3 574 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 SYTL5Q8TDW5 730 aaPredicted RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 PGBD1Q96JS3 809 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 ZNF830Q96NB3 372 aaPredicted RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 TTC12Q9H892 705 aaPredicted RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 DACT1Q9NYF0 836 aa16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
TM9SF1-202ENST00000396854 PLXNA1Q9UIW2 1896 aa16.83■□□□□ 0.29
TM9SF1-202ENST00000396854 PFASO15067 1338 aa16.83■□□□□ 0.29
TM9SF1-202ENST00000396854 CRHR2Q13324 411 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 INF2Q27J81 1249 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 NSMFQ6X4W1 530 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 SLC30A10Q6XR72 485 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 TBCKQ8TEA7 893 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 CRYGNQ8WXF5 182 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 USP28Q96RU2 1077 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 PORCNQ9H237 461 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 CYP39A1Q9NYL5 469 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 COL20A1Q9P218 1284 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
TM9SF1-202ENST00000396854 HSPA6P17066 643 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 SREBF1P36956 1147 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 GLIPR1L2Q4G1C9 344 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 CPA4Q9UI42 421 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 RCOR1Q9UKL0 485 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 CFHR5Q9BXR6 569 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 EHMT1Q9H9B1 1298 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
TM9SF1-202ENST00000396854 LRRC37A2A6NM11 1700 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 CAMK4Q16566 473 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 ANKRD35Q8N283 1001 aa16.81■□□□□ 0.28
TM9SF1-202ENST00000396854 MAP7D2Q96T17 732 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms