RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 CTNNA3Q9UI47 895 aa19.07■□□□□ 0.64
CLTA-203ENST00000396603 PCDHA11Q9Y5I1 949 aa19.07■□□□□ 0.64
CLTA-203ENST00000396603 SLC4A7Q9Y6M7 1214 aa19.07■□□□□ 0.64
CLTA-203ENST00000396603 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
CLTA-203ENST00000396603 CHD9Q3L8U1 2897 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 GRXCR1A8MXD5 290 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 PTGS1P23219 599 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 OTOP2Q7RTS6 562 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 ATXN2LQ8WWM7 1075 aaKnown RBP19.06■□□□□ 0.64
CLTA-203ENST00000396603 IWS1Q96ST2 819 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 KAT14Q9H8E8 782 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 CNNM2Q9H8M5 875 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
CLTA-203ENST00000396603 SCN10AQ9Y5Y9 1956 aa19.05■□□□□ 0.64
CLTA-203ENST00000396603 MYL3P08590 195 aa19.05■□□□□ 0.64
CLTA-203ENST00000396603 TXNP10599 105 aaKnown RBP19.05■□□□□ 0.64
CLTA-203ENST00000396603 ACTN1P12814 892 aa19.05■□□□□ 0.64
CLTA-203ENST00000396603 IMMTQ16891 758 aaKnown RBP19.05■□□□□ 0.64
CLTA-203ENST00000396603 ERICH6BQ5W0A0 696 aa19.05■□□□□ 0.64
CLTA-203ENST00000396603 NSUN6Q8TEA1 469 aaKnown RBP19.05■□□□□ 0.64
CLTA-203ENST00000396603 ZSCAN10Q96SZ4 725 aaPredicted RBP19.05■□□□□ 0.64
CLTA-203ENST00000396603 KRT23Q9C075 422 aa19.05■□□□□ 0.64
CLTA-203ENST00000396603 TRMT13Q9NUP7 481 aaKnown RBP19.05■□□□□ 0.64
CLTA-203ENST00000396603 KDM4AO75164 1064 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 BFSP2Q13515 415 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
CLTA-203ENST00000396603 NBPF20Q3BBV1 942 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 B4GALNT3Q6L9W6 998 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 CCDC62Q6P9F0 684 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 SESTD1Q86VW0 696 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 SAMD3Q8N6K7 520 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 USP38Q8NB14 1042 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 PHOSPHO2Q8TCD6 241 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 VWCEQ96DN2 955 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 PRDM12Q9H4Q4 367 aa19.04■□□□□ 0.64
CLTA-203ENST00000396603 MAP3K20Q9NYL2 800 aaKnown RBP19.04■□□□□ 0.64
CLTA-203ENST00000396603 MRPL11Q9Y3B7 192 aaKnown RBP19.04■□□□□ 0.64
CLTA-203ENST00000396603 PARNO95453 639 aaKnown RBP19.03■□□□□ 0.64
CLTA-203ENST00000396603 ATP2A2P16615 1042 aaKnown RBP19.03■□□□□ 0.64
CLTA-203ENST00000396603 GHRHRQ02643 423 aa19.03■□□□□ 0.64
CLTA-203ENST00000396603 USH1GQ495M9 461 aa19.03■□□□□ 0.64
CLTA-203ENST00000396603 CWC27Q6UX04 472 aaKnown RBP19.03■□□□□ 0.64
CLTA-203ENST00000396603 ADGRF4Q8IZF3 695 aa19.03■□□□□ 0.64
CLTA-203ENST00000396603 CCDC155Q8N6L0 562 aa19.03■□□□□ 0.64
CLTA-203ENST00000396603 EMID1Q96A84 441 aaPredicted RBP19.03■□□□□ 0.64
CLTA-203ENST00000396603 SLC9A7Q96T83 725 aa19.03■□□□□ 0.64
CLTA-203ENST00000396603 GH1P01241 217 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 PARP1P09874 1014 aaKnown RBP19.02■□□□□ 0.64
CLTA-203ENST00000396603 GOLGA8HP0CJ92 632 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 CYP2C9P11712 490 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 STXBP2Q15833 593 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
CLTA-203ENST00000396603 RETREG2Q8NC44 543 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 CAGE1Q8TC20 777 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 SYTL5Q8TDW5 730 aaPredicted RBP19.02■□□□□ 0.64
CLTA-203ENST00000396603 SCLYQ96I15 445 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 ZKSCAN3Q9BRR0 538 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 UBA5Q9GZZ9 404 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 NKX2-4Q9H2Z4 354 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 THEGQ9P2T0 379 aa19.02■□□□□ 0.64
CLTA-203ENST00000396603 YBX2Q9Y2T7 364 aaKnown RBP19.02■□□□□ 0.64
CLTA-203ENST00000396603 BAIAP3O94812 1187 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 IQCF3P0C7M6 154 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 RBL2Q08999 1139 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 TRAF1Q13077 416 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 FAM47CQ5HY64 1035 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 PPP2R2DQ66LE6 453 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 FBXO11Q86XK2 927 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 ZSWIM5Q9P217 1185 aa19.01■□□□□ 0.63
CLTA-203ENST00000396603 ZBBXA8MT70 800 aa19■□□□□ 0.63
CLTA-203ENST00000396603 B4E1Z4 1266 aa19■□□□□ 0.63
CLTA-203ENST00000396603 ARIH2O95376 493 aa19■□□□□ 0.63
CLTA-203ENST00000396603 MMP3P08254 477 aa19■□□□□ 0.63
CLTA-203ENST00000396603 POU3F3P20264 500 aaPredicted RBP19■□□□□ 0.63
CLTA-203ENST00000396603 CASTP20810 708 aaKnown RBP19■□□□□ 0.63
CLTA-203ENST00000396603 ADGRE1Q14246 886 aa19■□□□□ 0.63
CLTA-203ENST00000396603 QRICH1Q2TAL8 776 aa19■□□□□ 0.63
CLTA-203ENST00000396603 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
CLTA-203ENST00000396603 AFAP1L1Q8TED9 768 aa19■□□□□ 0.63
CLTA-203ENST00000396603 RMDN3Q96TC7 470 aa19■□□□□ 0.63
CLTA-203ENST00000396603 UBAC1Q9BSL1 405 aa19■□□□□ 0.63
CLTA-203ENST00000396603 TSPYL2Q9H2G4 693 aaPredicted RBP19■□□□□ 0.63
CLTA-203ENST00000396603 NOD1Q9Y239 953 aa19■□□□□ 0.63
CLTA-203ENST00000396603 EIF3JO75822 258 aaKnown RBP18.99■□□□□ 0.63
CLTA-203ENST00000396603 TMEM67Q5HYA8 995 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 KCNV1Q6PIU1 500 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 COPS5Q92905 334 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 CCDC136Q96JN2 1154 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 TAAR1Q96RJ0 339 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 KATNAL1Q9BW62 490 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 AMNQ9BXJ7 453 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 JMJD4Q9H9V9 463 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 PRDM6Q9NQX0 595 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 MUC3AQ02505 3323 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
CLTA-203ENST00000396603 HSD17B4P51659 736 aa18.98■□□□□ 0.63
CLTA-203ENST00000396603 ARHGAP1Q07960 439 aa18.98■□□□□ 0.63
CLTA-203ENST00000396603 DGKDQ16760 1214 aa18.98■□□□□ 0.63
CLTA-203ENST00000396603 IFIT1BQ5T764 474 aaKnown RBP18.98■□□□□ 0.63
CLTA-203ENST00000396603 ARHGEF16Q5VV41 709 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms