RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 F13A1P00488 732 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 SCG2P13521 617 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 CACNB2Q08289 660 aaPredicted RBP9.74□□□□□ -0.85
HERC4-203ENST00000395185 TRAF1Q13077 416 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 RESTQ13127 1097 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 MSL3Q8N5Y2 521 aaKnown RBP9.74□□□□□ -0.85
HERC4-203ENST00000395185 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 REPS2Q8NFH8 660 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 TRIB2Q92519 343 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 TNPO1Q92973 898 aaKnown RBP9.74□□□□□ -0.85
HERC4-203ENST00000395185 TNFRSF25Q93038 417 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 C8orf76Q96K31 380 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 PHF20Q9BVI0 1012 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.74□□□□□ -0.85
HERC4-203ENST00000395185 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
HERC4-203ENST00000395185 BARHL2Q9NY43 387 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 CCPG1Q9ULG6 757 aa9.74□□□□□ -0.85
HERC4-203ENST00000395185 FRMPD2Q68DX3 1309 aaPredicted RBP9.74□□□□□ -0.85
HERC4-203ENST00000395185 BAZ2BQ9UIF8 2168 aaKnown RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 hCG_1984214I3L0E3 225 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 STXBP3O00186 592 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 ZBTB5O15062 677 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 ALAS1P13196 640 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 SLC16A2P36021 539 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 CCL14Q16627 93 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 ZNF713Q8N859 430 aaPredicted RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 ANKLE1Q8NAG6 615 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 DAGLBQ8NCG7 672 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 NPLOC4Q8TAT6 608 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 RRP36Q96EU6 259 aaKnown RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 PIGSQ96S52 555 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 HTATIP2Q9BUP3 242 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 ZMYND12Q9H0C1 365 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 ACAD9Q9H845 621 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 PAK6Q9NQU5 681 aaPredicted RBP9.73□□□□□ -0.85
HERC4-203ENST00000395185 HOMER2Q9NSB8 354 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 NRBP1Q9UHY1 535 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 CNPY2Q9Y2B0 182 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 RIPK3Q9Y572 518 aa9.73□□□□□ -0.85
HERC4-203ENST00000395185 B4DLN1 442 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 FARP2O94887 1054 aaPredicted RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 MMP1P03956 469 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 ICAM1P05362 532 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 PGK2P07205 417 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 CYP2C19P33261 490 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 MRPL12P52815 198 aaKnown RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 QRICH1Q2TAL8 776 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 ZNF792Q3KQV3 632 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 MAP3K21Q5TCX8 1036 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 WWC2Q6AWC2 1192 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 GALNT17Q6IS24 598 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 NECAB2Q7Z6G3 386 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 ARRDC4Q8NCT1 418 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 DPF3Q92784 378 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 MAML3Q96JK9 1138 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 AGBL1Q96MI9 1066 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 TINF2Q9BSI4 451 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 TMEM121BQ9BXQ6 578 aaPredicted RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 RANBP17Q9H2T7 1088 aaKnown RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 FOXP1Q9H334 677 aaPredicted RBP9.72□□□□□ -0.85
HERC4-203ENST00000395185 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 RNF146Q9NTX7 359 aa9.72□□□□□ -0.85
HERC4-203ENST00000395185 ASB14A6NK59 587 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 KIF28PB7ZC32 967 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 ADAMTS3O15072 1205 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 SNAP25P60880 206 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 GHRHRQ02643 423 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 TRIM32Q13049 653 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 ATL3Q6DD88 541 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 PPP1R18Q6NYC8 613 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.71□□□□□ -0.86
HERC4-203ENST00000395185 MCF2L2Q86YR7 1114 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 MAF1Q9H063 256 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 VPS54Q9P1Q0 977 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 ADD3Q9UEY8 706 aaKnown RBP9.71□□□□□ -0.86
HERC4-203ENST00000395185 DDX20Q9UHI6 824 aaKnown RBP9.71□□□□□ -0.86
HERC4-203ENST00000395185 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 PFASO15067 1338 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 ZNF536O15090 1300 aa9.71□□□□□ -0.86
HERC4-203ENST00000395185 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 H3BQV1 296 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 OPLAHO14841 1288 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 SEPT4O43236 478 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 BAG4O95429 457 aaKnown RBP9.7□□□□□ -0.86
HERC4-203ENST00000395185 XBP1P17861 261 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 CALML3P27482 149 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 CCND3P30281 292 aaPredicted RBP9.7□□□□□ -0.86
HERC4-203ENST00000395185 GUCY1B3Q02153 619 aa9.7□□□□□ -0.86
HERC4-203ENST00000395185 CDC37Q16543 378 aaPredicted RBP9.7□□□□□ -0.86
HERC4-203ENST00000395185 NSMFQ6X4W1 530 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms