RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ZNF713Q8N859 430 aaPredicted RBP22.88■■□□□ 1.25
PRKCD-202ENST00000394729 MTMR14Q8NCE2 650 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 CALML4Q96GE6 196 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 VPS33BQ9H267 617 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 ZHX3Q9H4I2 956 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 RAVER2Q9HCJ3 691 aaKnown RBP22.88■■□□□ 1.25
PRKCD-202ENST00000394729 TRMT1Q9NXH9 659 aaKnown RBP22.88■■□□□ 1.25
PRKCD-202ENST00000394729 FER1L6Q2WGJ9 1857 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 PRCPP42785 496 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 ZNF280AP59817 542 aaPredicted RBP22.88■■□□□ 1.25
PRKCD-202ENST00000394729 NT5DC1Q5TFE4 455 aa22.88■■□□□ 1.25
PRKCD-202ENST00000394729 GREB1LQ9C091 1923 aaPredicted RBP22.88■■□□□ 1.25
PRKCD-202ENST00000394729 ALAS1P13196 640 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 NCAPH2Q6IBW4 605 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 SARM1Q6SZW1 724 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 SPATA20Q8TB22 786 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 CPLX3Q8WVH0 158 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 GTPBP6O43824 516 aaPredicted RBP22.87■■□□□ 1.25
PRKCD-202ENST00000394729 MRFAP1L1Q96HT8 127 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 GSDMAQ96QA5 445 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 BPIFA3Q9BQP9 254 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 SLC39A2Q9NP94 309 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 R3HCC1Q9Y3T6 440 aaKnown RBP22.87■■□□□ 1.25
PRKCD-202ENST00000394729 ZHX2Q9Y6X8 837 aa22.87■■□□□ 1.25
PRKCD-202ENST00000394729 POTEB3A0JP26 581 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 POTECB2RU33 542 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 PPP1R3GB7ZBB8 358 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 PMS1P54277 932 aaKnown RBP22.86■■□□□ 1.25
PRKCD-202ENST00000394729 GRB10Q13322 594 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 POTEBQ6S5H4 581 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 CCPG1Q9ULG6 757 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 E9PMD0 336 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 DDX39AO00148 427 aaKnown RBP22.86■■□□□ 1.25
PRKCD-202ENST00000394729 KRT79Q5XKE5 535 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 NFIBO00712 420 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 IKBKBO14920 756 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 HMGCS2P54868 508 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 NOLC1Q14978 699 aaKnown RBP eCLIP22.86■■□□□ 1.25
PRKCD-202ENST00000394729 LDHDQ86WU2 507 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 IGSF22Q8N9C0 903 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 HOOK2Q96ED9 719 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 KIAA1024Q9UPX6 916 aa22.86■■□□□ 1.25
PRKCD-202ENST00000394729 NPHP3-ACAD11A0A0J9YXS1 232 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 LAD1O00515 517 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 PRPHP41219 470 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 PDE4DQ08499 809 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 NELFBQ8WX92 580 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 PNMA5Q96PV4 448 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 INTS13Q9NVM9 706 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 TEX33O43247 280 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 FKBP1CQ5VVH2 108 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 PPP1R18Q6NYC8 613 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 GLIS3Q8NEA6 775 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 CNKSR2Q8WXI2 1034 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 CCSER1Q9C0I3 900 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 GPRC5DQ9NZD1 345 aa22.85■■□□□ 1.25
PRKCD-202ENST00000394729 POTEFA5A3E0 1075 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 POTEIP0CG38 1075 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 RPS12P25398 132 aaKnown RBP22.84■■□□□ 1.25
PRKCD-202ENST00000394729 STK4Q13043 487 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 LRRC41Q15345 812 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 POTEGQ6S5H5 508 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 POTEEQ6S8J3 1075 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 CHURC1Q8WUH1 139 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 DACH1Q9UI36 760 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 PSME4Q14997 1843 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 LRRC8AQ8IWT6 810 aa22.84■■□□□ 1.25
PRKCD-202ENST00000394729 C16orf45Q96MC5 204 aaPredicted RBP22.84■■□□□ 1.25
PRKCD-202ENST00000394729 SKILP12757 684 aa22.83■■□□□ 1.25
PRKCD-202ENST00000394729 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.25
PRKCD-202ENST00000394729 VPS16Q9H269 839 aa22.83■■□□□ 1.25
PRKCD-202ENST00000394729 ADM5C9JUS6 153 aa22.83■■□□□ 1.24
PRKCD-202ENST00000394729 LMNB1P20700 586 aa22.83■■□□□ 1.24
PRKCD-202ENST00000394729 TRIM9Q9C026 710 aa22.83■■□□□ 1.24
PRKCD-202ENST00000394729 BLOC1S4Q9NUP1 217 aa22.83■■□□□ 1.24
PRKCD-202ENST00000394729 ABCB11O95342 1321 aa22.83■■□□□ 1.24
PRKCD-202ENST00000394729 MYMKA6NI61 221 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 VCAM1P19320 739 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 MOB2Q70IA6 237 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 SYT17Q9BSW7 474 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 RPAP3Q9H6T3 665 aaPredicted RBP22.82■■□□□ 1.24
PRKCD-202ENST00000394729 USP27XA6NNY8 438 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 TBC1D12O60347 775 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 SORBS3O60504 671 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 ADKP55263 362 aaKnown RBP22.82■■□□□ 1.24
PRKCD-202ENST00000394729 GPIHBP1Q8IV16 184 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 KBTBD4Q9NVX7 518 aa22.82■■□□□ 1.24
PRKCD-202ENST00000394729 CTDP1Q9Y5B0 961 aaPredicted RBP22.82■■□□□ 1.24
PRKCD-202ENST00000394729 BRCA1P38398 1863 aaKnown RBP22.82■■□□□ 1.24
PRKCD-202ENST00000394729 PPP4R3AQ6IN85 833 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 ARMCX5Q6P1M9 558 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 TRIML1Q8N9V2 468 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 LARP4BQ92615 738 aaKnown RBP22.81■■□□□ 1.24
PRKCD-202ENST00000394729 POLR2AP24928 1970 aaKnown RBP22.81■■□□□ 1.24
PRKCD-202ENST00000394729 TULP1O00294 542 aaPredicted RBP22.81■■□□□ 1.24
PRKCD-202ENST00000394729 NSMFQ6X4W1 530 aa22.81■■□□□ 1.24
PRKCD-202ENST00000394729 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.81■■□□□ 1.24
PRKCD-202ENST00000394729 ENOX1Q8TC92 643 aaKnown RBP22.81■■□□□ 1.24
PRKCD-202ENST00000394729 AK8Q96MA6 479 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms