RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 MPHOSPH10O00566 681 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 MMP1P03956 469 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 SLC5A1P13866 664 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 PAX7P23759 505 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 HLFQ16534 295 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 IFT20Q8IY31 132 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 KRT23Q9C075 422 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 MED23Q9ULK4 1368 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 RGPD3A6NKT7 1758 aaPredicted RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 RGPD4Q7Z3J3 1758 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 FGFR1OPO95684 399 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 PCK1P35558 622 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 COPB2P35606 906 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 TCIRG1Q13488 830 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 SNCBQ16143 134 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 NAIF1Q69YI7 327 aaPredicted RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 FCHSD1Q86WN1 690 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 LCORLQ8N3X6 602 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 CTNND1O60716 968 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 IGHMBP2P38935 993 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 GYG1P46976 350 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 DYNLL1P63167 89 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 CACNA2D3Q8IZS8 1091 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 MDM1Q8TC05 714 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 ADAMTS1Q9UHI8 967 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 PTPN22Q9Y2R2 807 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 NUP188Q5SRE5 1749 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 USP17L12C9JPN9 530 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 USP17L21D6R901 530 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 SH2B2O14492 632 aaPredicted RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 YY1P25490 414 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 TCP11X2Q5H9J9 407 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 RNPC3Q96LT9 517 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 NOX5Q96PH1 765 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 PDGFDQ9GZP0 370 aaPredicted RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 DDX47Q9H0S4 455 aaKnown RBP9.74□□□□□ -0.85
RTN4-206ENST00000394611 RMND1Q9NWS8 449 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 TBK1Q9UHD2 729 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 PLAAQ9Y263 795 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 RREB1Q92766 1687 aa9.74□□□□□ -0.85
RTN4-206ENST00000394611 UBR3Q6ZT12 1888 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 PPP6R2O75170 966 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 PDHA1P08559 390 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 ARHGAP25P42331 645 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 PICALMQ13492 652 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 KAT2BQ92831 832 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 CALML4Q96GE6 196 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 STIM2Q9P246 746 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 FCER1AP12319 257 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 NEDD9Q14511 834 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 CFAP221Q4G0U5 840 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 USPL1Q5W0Q7 1092 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 MB21D2Q8IYB1 491 aaPredicted RBP9.73□□□□□ -0.85
RTN4-206ENST00000394611 KIF2BQ8N4N8 673 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 IL17RAQ96F46 866 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 PANX2Q96RD6 677 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 RNF41Q9H4P4 317 aaPredicted RBP9.73□□□□□ -0.85
RTN4-206ENST00000394611 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 FAM184BQ9ULE4 1060 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 RFC4P35249 363 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 PAK2Q13177 524 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 SEPT7Q16181 437 aaKnown RBP9.73□□□□□ -0.85
RTN4-206ENST00000394611 PHLDB2Q86SQ0 1253 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 GDAP1Q8TB36 358 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 GJA10Q969M2 543 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 RBM12Q9NTZ6 932 aaKnown RBP9.73□□□□□ -0.85
RTN4-206ENST00000394611 SAMD15Q9P1V8 674 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 CAPN6Q9Y6Q1 641 aa9.73□□□□□ -0.85
RTN4-206ENST00000394611 TUBGCP6Q96RT7 1819 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 G3V3G9 751 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 PTPREP23469 700 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 NR1I3Q14994 352 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 CCDC6Q16204 474 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 GNPTABQ3T906 1256 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 PLBD2Q8NHP8 589 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 SPDL1Q96EA4 605 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 TMEM87BQ96K49 555 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 ZIM3Q96PE6 472 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 ELAC2Q9BQ52 826 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 BIN2Q9UBW5 565 aaPredicted RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 ADD3Q9UEY8 706 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 PDE2AO00408 941 aaPredicted RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 KLHL30Q0D2K2 578 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 TRADDQ15628 312 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 EARS2Q5JPH6 523 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 FAM133AQ8N9E0 248 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 TBC1D5Q92609 795 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 TSG101Q99816 390 aa9.72□□□□□ -0.85
RTN4-206ENST00000394611 CPSF2Q9P2I0 782 aaKnown RBP9.72□□□□□ -0.85
RTN4-206ENST00000394611 CHORDC1Q9UHD1 332 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms