RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 SNX29Q8TEQ0 813 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 FUT8Q9BYC5 575 aa18.58■□□□□ 0.57
PRDM5-202ENST00000394435 AFF2P51816 1311 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 LRRC37AA6NMS7 1700 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CTAGE15A4D2H0 777 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CCDC151A5D8V7 595 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 MPHOSPH10O00566 681 aaKnown RBP18.58■□□□□ 0.56
PRDM5-202ENST00000394435 POLR3GO15318 223 aaPredicted RBP18.58■□□□□ 0.56
PRDM5-202ENST00000394435 RHOXF2BP0C7M4 288 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CTAGE8P0CG41 777 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 SHMT1P34896 483 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 ZBED6P86452 979 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CCDC122Q5T0U0 273 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 NCAPH2Q6IBW4 605 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CENPPQ6IPU0 288 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CTAGE6Q86UF2 777 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 CTAGE4Q8IX94 777 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 RHOXF2Q9BQY4 288 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 RIC8AQ9NPQ8 531 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 ATP6V0A2Q9Y487 856 aa18.58■□□□□ 0.56
PRDM5-202ENST00000394435 ENC1O14682 589 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 CCDC96Q2M329 555 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 KCNK18Q7Z418 384 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 KIAA1328Q86T90 577 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 ZSCAN29Q8IWY8 852 aaPredicted RBP18.57■□□□□ 0.56
PRDM5-202ENST00000394435 RETREG2Q8NC44 543 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 RAD54LQ92698 747 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 GJA10Q969M2 543 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 ZC3H12CQ9C0D7 883 aaKnown RBP18.57■□□□□ 0.56
PRDM5-202ENST00000394435 NHEJ1Q9H9Q4 299 aaPredicted RBP18.57■□□□□ 0.56
PRDM5-202ENST00000394435 ZNHIT6Q9NWK9 470 aaKnown RBP18.57■□□□□ 0.56
PRDM5-202ENST00000394435 ONECUT3O60422 494 aaPredicted RBP18.57■□□□□ 0.56
PRDM5-202ENST00000394435 IDEP14735 1019 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 KRT83P78385 493 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 FKBP15Q5T1M5 1219 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 KRT79Q5XKE5 535 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 KCTD1Q719H9 257 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 RAB34Q9BZG1 259 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 UBXN6Q9BZV1 441 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 HDAC6Q9UBN7 1215 aa18.57■□□□□ 0.56
PRDM5-202ENST00000394435 ADAMTSL1Q8N6G6 1762 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 PVALEFA0A1B0GWK0 134 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 USP17L10C9JJH3 530 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 CYLC1P35663 651 aaPredicted RBP18.56■□□□□ 0.56
PRDM5-202ENST00000394435 PDIA5Q14554 519 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 CDC42EP5Q6NZY7 148 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 JAKMIP2Q96AA8 810 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 ERGIC2Q96RQ1 377 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 SWAP70Q9UH65 585 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 SUGT1Q9Y2Z0 365 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 RCCD1A6NED2 376 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 POTEB2H3BUK9 544 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 PSMD14O00487 310 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 ECM1Q16610 540 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 TMC4Q7Z404 712 aa18.56■□□□□ 0.56
PRDM5-202ENST00000394435 SMC1AQ14683 1233 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 VWA3BQ502W6 1294 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 SLC27A3Q5K4L6 730 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 DDX12PQ92771 950 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 CUL5Q93034 780 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 UIMC1Q96RL1 719 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 DDX25Q9UHL0 483 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 ATP1A1P05023 1023 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 OAS2P29728 719 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 CLK2P49760 499 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 LRRC41Q15345 812 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 TMEM119Q4V9L6 283 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 TRAPPC11Q7Z392 1133 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 NOA1Q8NC60 698 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 GLIS3Q8NEA6 775 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 HAS1Q92839 578 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 LACRTQ9GZZ8 138 aa18.55■□□□□ 0.56
PRDM5-202ENST00000394435 ZCCHC17Q9NP64 241 aaKnown RBP18.55■□□□□ 0.56
PRDM5-202ENST00000394435 CYP27A1Q02318 531 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 NFIAQ12857 509 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 A0A1W2PQJ5 194 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 EIF3CLB5ME19 914 aaKnown RBP18.54■□□□□ 0.56
PRDM5-202ENST00000394435 RAD21O60216 631 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 MARCH6O60337 910 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 CCDC170Q8IYT3 715 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 GUF1Q8N442 669 aaKnown RBP18.54■□□□□ 0.56
PRDM5-202ENST00000394435 EIF3CQ99613 913 aaKnown RBP18.54■□□□□ 0.56
PRDM5-202ENST00000394435 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
PRDM5-202ENST00000394435 QSER1Q2KHR3 1735 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 ZBTB5O15062 677 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 EPHB6O15197 1021 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 KRT86O43790 486 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 SRGAP2O75044 1071 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 TRIM37O94972 964 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 HLA-DOAP06340 250 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 PLEKP08567 350 aaPredicted RBP18.53■□□□□ 0.56
PRDM5-202ENST00000394435 ERCC3P19447 782 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 MRPL12P52815 198 aaKnown RBP18.53■□□□□ 0.56
PRDM5-202ENST00000394435 TUBB4BP68371 445 aa18.53■□□□□ 0.56
PRDM5-202ENST00000394435 FIGNQ5HY92 759 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms