RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 TGS1Q96RS0 853 aaKnown RBP12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 NACAP1Q9BZK3 213 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 TM6SF1Q9BZW5 370 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 AP5M1Q9H0R1 490 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 IRF2BPLQ9H1B7 796 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
VTI1BP2-201ENST00000394154 TNKSO95271 1327 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 H3BQ06 376 aaPredicted RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 FGAP02671 866 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 IRS1P35568 1242 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 CCDC144CPQ8IYA2 1237 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 FGD4Q96M96 766 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 ZBED2Q9BTP6 218 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 CRNKL1Q9BZJ0 848 aaKnown RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 TRMT13Q9NUP7 481 aaKnown RBP12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 MTUS1Q9ULD2 1270 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 SLC4A4Q9Y6R1 1079 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 TECTAO75443 2155 aa12.93□□□□□ -0.34
VTI1BP2-201ENST00000394154 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 NEK4P51957 841 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 CLEC10AQ8IUN9 316 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 RETREG2Q8NC44 543 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 EDAQ92838 391 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 RIOK1Q9BRS2 568 aaKnown RBP12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 MUTYHQ9UIF7 546 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
VTI1BP2-201ENST00000394154 ZFHX2Q9C0A1 2572 aaPredicted RBP12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 ZNF213O14771 459 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 DYNC1LI2O43237 492 aaPredicted RBP12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 CYP21A2P08686 494 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 IQCF3P0C7M6 154 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 MCM2P49736 904 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 GIMAP6Q6P9H5 292 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 ANKRD35Q8N283 1001 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 PABPC5Q96DU9 382 aaKnown RBP12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 MRPL38Q96DV4 380 aaKnown RBP12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 NAPBQ9H115 298 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 FAM86C1Q9NVL1 165 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 Q9Y3F1 56 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
VTI1BP2-201ENST00000394154 ZMYM6O95789 1325 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 DCHS1Q96JQ0 3298 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 TMEM221A6NGB7 291 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 M0R296 226 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 FOXP2O15409 715 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 TDO2P48775 406 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 PTPROQ16827 1216 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 TIGD5Q53EQ6 642 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 RAD9AQ99638 391 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 SLF1Q9BQI6 1058 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
VTI1BP2-201ENST00000394154 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 LINC01553A4QN01 128 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 PRKAB2O43741 272 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 AKR1B1P15121 316 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 BFSP2Q13515 415 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 BLOC1S2Q6QNY1 142 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 RUFY3Q7L099 469 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 RNF135Q8IUD6 432 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 ATOH1Q92858 354 aaPredicted RBP12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 NEK1Q96PY6 1258 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
VTI1BP2-201ENST00000394154 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 ASB14A6NK59 587 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 PROB1E7EW31 1015 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 RAD21O60216 631 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 GJB5O95377 273 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 EEF2P13639 858 aaKnown RBP12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 SMPD1P17405 629 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 HAND2P61296 217 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 EVX2Q03828 476 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 COL19A1Q14993 1142 aa12.88□□□□□ -0.35
VTI1BP2-201ENST00000394154 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms