RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 SYDE2Q5VT97 1194 aa23.42■■□□□ 1.34
POLR2J-202ENST00000393794 SLC30A10Q6XR72 485 aa23.42■■□□□ 1.34
POLR2J-202ENST00000393794 MIER1Q8N108 512 aa23.42■■□□□ 1.34
POLR2J-202ENST00000393794 HLA-CQ95604 372 aa23.42■■□□□ 1.34
POLR2J-202ENST00000393794 GPR37L1O60883 481 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 RBL2Q08999 1139 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 SESTD1Q86VW0 696 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 RETREG2Q8NC44 543 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 SCFD2Q8WU76 684 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 PPP1R13LQ8WUF5 828 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 COPS5Q92905 334 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 GPHNQ9NQX3 736 aaPredicted RBP23.41■■□□□ 1.34
POLR2J-202ENST00000393794 TCP11L1Q9NUJ3 509 aa23.41■■□□□ 1.34
POLR2J-202ENST00000393794 KIF28PB7ZC32 967 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 RPS6P62753 249 aaKnown RBP23.4■■□□□ 1.34
POLR2J-202ENST00000393794 BFSP2Q13515 415 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 ALX1Q15699 326 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 BRDTQ58F21 947 aaPredicted RBP23.4■■□□□ 1.34
POLR2J-202ENST00000393794 CCDC62Q6P9F0 684 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 DNERQ8NFT8 737 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 TMEM47Q9BQJ4 181 aa23.4■■□□□ 1.34
POLR2J-202ENST00000393794 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.34
POLR2J-202ENST00000393794 COL4A4P53420 1690 aaPredicted RBP23.39■■□□□ 1.34
POLR2J-202ENST00000393794 ARIH2O95376 493 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 PPP2R5BQ15173 497 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 VPS53Q5VIR6 699 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 RNF207Q6ZRF8 634 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 RGS22Q8NE09 1264 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 OTUD7AQ8TE49 926 aaPredicted RBP23.39■■□□□ 1.33
POLR2J-202ENST00000393794 CD320Q9NPF0 282 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 RCAN3Q9UKA8 241 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 PNMA2Q9UL42 364 aa23.39■■□□□ 1.33
POLR2J-202ENST00000393794 RAD50Q92878 1312 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 PTPDC1A2A3K4 754 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 LCHNA4D1U4 455 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 RANBP6O60518 1105 aaKnown RBP23.38■■□□□ 1.33
POLR2J-202ENST00000393794 CXCL10P02778 98 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 SNHG28P0DPA3 235 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 TOP1P11387 765 aaKnown RBP23.38■■□□□ 1.33
POLR2J-202ENST00000393794 WDR5P61964 334 aaKnown RBP23.38■■□□□ 1.33
POLR2J-202ENST00000393794 CCDC96Q2M329 555 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 FAM47CQ5HY64 1035 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 TMEM31Q5JXX7 168 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 CAGE1Q8TC20 777 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 AFAP1L1Q8TED9 768 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 DHX38Q92620 1227 aaKnown RBP23.38■■□□□ 1.33
POLR2J-202ENST00000393794 KAT2BQ92831 832 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 FSD1Q9BTV5 496 aa23.38■■□□□ 1.33
POLR2J-202ENST00000393794 FTOQ9C0B1 505 aaKnown RBP eCLIP23.38■■□□□ 1.33
POLR2J-202ENST00000393794 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
POLR2J-202ENST00000393794 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.37■■□□□ 1.33
POLR2J-202ENST00000393794 PI4K2BG5E9Z4 385 aa23.37■■□□□ 1.33
POLR2J-202ENST00000393794 PDHBP11177 359 aa23.37■■□□□ 1.33
POLR2J-202ENST00000393794 CALML3P27482 149 aa23.37■■□□□ 1.33
POLR2J-202ENST00000393794 TXNP10599 105 aaKnown RBP23.36■■□□□ 1.33
POLR2J-202ENST00000393794 PDE4DQ08499 809 aa23.36■■□□□ 1.33
POLR2J-202ENST00000393794 PTGISQ16647 500 aa23.36■■□□□ 1.33
POLR2J-202ENST00000393794 TCTN1Q2MV58 587 aa23.36■■□□□ 1.33
POLR2J-202ENST00000393794 MAF1Q9H063 256 aa23.36■■□□□ 1.33
POLR2J-202ENST00000393794 MTMR7Q9Y216 660 aa23.36■■□□□ 1.33
POLR2J-202ENST00000393794 FRMPD2Q68DX3 1309 aaPredicted RBP23.35■■□□□ 1.33
POLR2J-202ENST00000393794 GDF6Q6KF10 455 aaPredicted RBP23.35■■□□□ 1.33
POLR2J-202ENST00000393794 GPCPD1Q9NPB8 672 aa23.35■■□□□ 1.33
POLR2J-202ENST00000393794 HCN4Q9Y3Q4 1203 aa23.35■■□□□ 1.33
POLR2J-202ENST00000393794 NBNO60934 754 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 PARNO95453 639 aaKnown RBP23.34■■□□□ 1.33
POLR2J-202ENST00000393794 ERVK-21P61565 698 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 DEFB103AP81534 67 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 ZNF543Q08ER8 600 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 TRAF7Q6Q0C0 670 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 TMCO2Q7Z6W1 182 aaPredicted RBP23.34■■□□□ 1.33
POLR2J-202ENST00000393794 SUGCTQ9HAC7 445 aa23.34■■□□□ 1.33
POLR2J-202ENST00000393794 GJB5O95377 273 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 MMP3P08254 477 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 SELPP16109 830 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 KCNJ6P48051 423 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 ARHGAP1Q07960 439 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 CNKSR3Q6P9H4 555 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 TTC14Q96N46 770 aa23.33■■□□□ 1.33
POLR2J-202ENST00000393794 MPHOSPH6Q99547 160 aaKnown RBP23.33■■□□□ 1.33
POLR2J-202ENST00000393794 KIAA1217Q5T5P2 1943 aa23.33■■□□□ 1.32
POLR2J-202ENST00000393794 FGAP02671 866 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 MKRN4PQ13434 485 aaPredicted RBP23.32■■□□□ 1.32
POLR2J-202ENST00000393794 LRRC8DQ7L1W4 858 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 CCDC155Q8N6L0 562 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 GDPD5Q8WTR4 605 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 AFG1LQ8WV93 481 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 RAD9AQ99638 391 aa23.32■■□□□ 1.32
POLR2J-202ENST00000393794 SIP14410 1827 aa23.31■■□□□ 1.32
POLR2J-202ENST00000393794 ABHD14A-ACY1A0A1B0GW23 586 aa23.31■■□□□ 1.32
POLR2J-202ENST00000393794 TRIM71Q2Q1W2 868 aaKnown RBP23.31■■□□□ 1.32
POLR2J-202ENST00000393794 GTF2IRD1Q9UHL9 959 aa23.31■■□□□ 1.32
POLR2J-202ENST00000393794 NOD1Q9Y239 953 aa23.31■■□□□ 1.32
POLR2J-202ENST00000393794 ZMYM6O95789 1325 aa23.31■■□□□ 1.32
POLR2J-202ENST00000393794 LINC01553A4QN01 128 aa23.3■■□□□ 1.32
POLR2J-202ENST00000393794 B4DLN1 442 aa23.3■■□□□ 1.32
POLR2J-202ENST00000393794 CKBP12277 381 aa23.3■■□□□ 1.32
POLR2J-202ENST00000393794 MX1P20591 662 aa23.3■■□□□ 1.32
POLR2J-202ENST00000393794 MRPL12P52815 198 aaKnown RBP23.3■■□□□ 1.32
POLR2J-202ENST00000393794 TBC1D5Q92609 795 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms