RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 PXMP2Q9NR77 195 aa21.56■■□□□ 1.04
NME1-203ENST00000393196 Q9Y3F1 56 aa21.56■■□□□ 1.04
NME1-203ENST00000393196 NKRFO15226 690 aaKnown RBP eCLIP21.55■■□□□ 1.04
NME1-203ENST00000393196 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 EIF3JO75822 258 aaKnown RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 NEK4P51957 841 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 NAPAP54920 295 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 PFKFB3Q16875 520 aaPredicted RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 MCTP2Q6DN12 878 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 XRRA1Q6P2D8 792 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 FAM177A1Q8N128 213 aaPredicted RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 PAWRQ96IZ0 340 aaKnown RBP21.55■■□□□ 1.04
NME1-203ENST00000393196 C11orf49Q9H6J7 331 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 EHMT1Q9H9B1 1298 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 BARHL2Q9NY43 387 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 COL20A1Q9P218 1284 aa21.55■■□□□ 1.04
NME1-203ENST00000393196 RBM47A0AV96 593 aaKnown RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 STAM2O75886 525 aa21.54■■□□□ 1.04
NME1-203ENST00000393196 NR3C2P08235 984 aa21.54■■□□□ 1.04
NME1-203ENST00000393196 SCG2P13521 617 aa21.54■■□□□ 1.04
NME1-203ENST00000393196 HOXA13P31271 388 aaPredicted RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 RBM25P49756 843 aaKnown RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 FBXO16Q8IX29 292 aaPredicted RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 PDCD2LQ9BRP1 358 aa21.54■■□□□ 1.04
NME1-203ENST00000393196 TSEN34Q9BSV6 310 aaKnown RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 AP5M1Q9H0R1 490 aa21.54■■□□□ 1.04
NME1-203ENST00000393196 SLKQ9H2G2 1235 aaPredicted RBP21.54■■□□□ 1.04
NME1-203ENST00000393196 hCG_1642624A0A1W2PR95 340 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 EIF2AK2P19525 551 aaKnown RBP21.53■■□□□ 1.04
NME1-203ENST00000393196 CCND2P30279 289 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 TTLL4Q14679 1199 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 LRRC41Q15345 812 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 WWC2Q6AWC2 1192 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 TAPT1Q6NXT6 567 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 KCNV1Q6PIU1 500 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 FCHSD1Q86WN1 690 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 PCSK9Q8NBP7 692 aaKnown RBP21.53■■□□□ 1.04
NME1-203ENST00000393196 CCDC148Q8NFR7 591 aa21.53■■□□□ 1.04
NME1-203ENST00000393196 UPF3AQ9H1J1 476 aaKnown RBP21.53■■□□□ 1.04
NME1-203ENST00000393196 SPDYE3A6NKU9 549 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 PFKFB2O60825 505 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 FOSP01100 380 aaPredicted RBP21.52■■□□□ 1.04
NME1-203ENST00000393196 COL6A1P12109 1028 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 CST5P28325 142 aaPredicted RBP21.52■■□□□ 1.04
NME1-203ENST00000393196 ADCY7P51828 1080 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 AK2P54819 239 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 GJA9P57773 515 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 NKX3-2P78367 333 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 CCT2P78371 535 aaKnown RBP21.52■■□□□ 1.04
NME1-203ENST00000393196 SSRP1Q08945 709 aaKnown RBP21.52■■□□□ 1.04
NME1-203ENST00000393196 NTRK3Q16288 839 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 DUSP28Q4G0W2 176 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 BRDTQ58F21 947 aaPredicted RBP21.52■■□□□ 1.04
NME1-203ENST00000393196 ANO1Q5XXA6 986 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 EEPD1Q7L9B9 569 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 GPKOWQ92917 476 aaPredicted RBP eCLIP21.52■■□□□ 1.04
NME1-203ENST00000393196 WDR11Q9BZH6 1224 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 RIC8AQ9NPQ8 531 aa21.52■■□□□ 1.04
NME1-203ENST00000393196 FRMPD4Q14CM0 1322 aa21.52■■□□□ 1.03
NME1-203ENST00000393196 SYNRGQ9UMZ2 1314 aa21.52■■□□□ 1.03
NME1-203ENST00000393196 BAZ2BQ9UIF8 2168 aaKnown RBP21.51■■□□□ 1.03
NME1-203ENST00000393196 ESYT2A0FGR8 921 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 MOXD2PA6NHM9 499 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 STXBP3O00186 592 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 ZEB2O60315 1214 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 ADAMTS4O75173 837 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 ADCYAP1R1P41586 468 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 MNX1P50219 401 aaPredicted RBP21.51■■□□□ 1.03
NME1-203ENST00000393196 GNPTABQ3T906 1256 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 VSIG10LQ86VR7 867 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 SLC26A6Q9BXS9 759 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 NCOA5Q9HCD5 579 aaKnown RBP21.51■■□□□ 1.03
NME1-203ENST00000393196 MYH6P13533 1939 aa21.51■■□□□ 1.03
NME1-203ENST00000393196 MEIS2O14770 477 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 DEXIO95424 95 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 PGK1P00558 417 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 MYCNP04198 464 aaPredicted RBP21.5■■□□□ 1.03
NME1-203ENST00000393196 GNA11P29992 359 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 PGM5Q15124 567 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 RABEP1Q15276 862 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 GJC2Q5T442 439 aaPredicted RBP21.5■■□□□ 1.03
NME1-203ENST00000393196 USP17L6PQ6QN14 398 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 TLK2Q86UE8 772 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 BICD2Q8TD16 824 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 DIS3LQ8TF46 1054 aaKnown RBP21.5■■□□□ 1.03
NME1-203ENST00000393196 PHKBQ93100 1093 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 C6orf50Q9HD87 102 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 SH3GLB2Q9NR46 395 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 TPCN1Q9ULQ1 816 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 PHF24Q9UPV7 400 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 GNEQ9Y223 722 aaKnown RBP21.5■■□□□ 1.03
NME1-203ENST00000393196 NR2E3Q9Y5X4 410 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 SMCHD1A6NHR9 2005 aa21.5■■□□□ 1.03
NME1-203ENST00000393196 C6orf222P0C671 652 aaPredicted RBP21.49■■□□□ 1.03
NME1-203ENST00000393196 SMPD1P17405 629 aa21.49■■□□□ 1.03
NME1-203ENST00000393196 STK3Q13188 491 aa21.49■■□□□ 1.03
NME1-203ENST00000393196 AP3B2Q13367 1082 aa21.49■■□□□ 1.03
NME1-203ENST00000393196 KLHDC9Q8NEP7 349 aa21.49■■□□□ 1.03
NME1-203ENST00000393196 PDGFCQ9NRA1 345 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms