RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
LCA5-202ENST00000392959 PLTPP55058 493 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 BPIFB4P59827 614 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 IL9RQ01113 521 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 PI16Q6UXB8 463 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 AMNQ9BXJ7 453 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
LCA5-202ENST00000392959 ZSWIM5Q9P217 1185 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 CLGNO14967 610 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 PDE6BP35913 854 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 CYP27A1Q02318 531 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 GRM1Q13255 1194 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 MAP7Q14244 749 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
LCA5-202ENST00000392959 NOD1Q9Y239 953 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
LCA5-202ENST00000392959 AFPP02771 609 aaKnown RBP14.31□□□□□ -0.12
LCA5-202ENST00000392959 SESN3P58005 492 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 C2orf54Q08AI8 447 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 ZBTB8OSQ8IWT0 167 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 SMCR8Q8TEV9 937 aaPredicted RBP14.31□□□□□ -0.12
LCA5-202ENST00000392959 PCDHB6Q9Y5E3 794 aa14.31□□□□□ -0.12
LCA5-202ENST00000392959 SOS2Q07890 1332 aaPredicted RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 POC1B-GALNT4F8VUJ3 575 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 SEMA3EO15041 775 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 EIF4A3P38919 411 aaKnown RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 MYL7Q01449 175 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 LMNB2Q03252 620 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 ARID5BQ14865 1188 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 NT5C1BQ96P26 610 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 EFCC1Q9HA90 598 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 PTPN22Q9Y2R2 807 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 ZNF804BA4D1E1 1349 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 SYNMO15061 1565 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 KDM5CP41229 1560 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 TMEM232C9JQI7 657 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 FTCDO95954 541 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 GCFC2P16383 781 aaKnown RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 DHX9Q08211 1270 aaKnown RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 KAZNQ674X7 775 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 TBCKQ8TEA7 893 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 TCP11Q8WWU5 503 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 MIS12Q9H081 205 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 NHEJ1Q9H9Q4 299 aaPredicted RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 PRKAB2O43741 272 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 PSMC2P35998 433 aaKnown RBP14.3□□□□□ -0.12
LCA5-202ENST00000392959 NNTQ13423 1086 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 ASPRV1Q53RT3 343 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 SH2D4BQ5SQS7 431 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 ARHGEF16Q5VV41 709 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 CCDC17Q96LX7 622 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 VCX3AQ9NNX9 186 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
LCA5-202ENST00000392959 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 TNNC2P02585 160 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 MFAP3P55082 362 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 DMP1Q13316 513 aaPredicted RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 KIAA0825Q8IV33 1275 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 TAB3Q8N5C8 712 aaPredicted RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 RIOK1Q9BRS2 568 aaKnown RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 EVI5O60447 810 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 MOCS3O95396 460 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 SCNN1DP51172 638 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 TRIM50Q86XT4 487 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 POMGNT1Q8WZA1 660 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 THAP9Q9H5L6 903 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 PRPF3O43395 683 aaKnown RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 ZKSCAN8Q15776 578 aaPredicted RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 OPHN1O60890 802 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 LUC7L3O95232 432 aaKnown RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 YWHAGP61981 247 aaKnown RBP eCLIP14.29□□□□□ -0.12
LCA5-202ENST00000392959 DYNLL1P63167 89 aaKnown RBP14.29□□□□□ -0.12
LCA5-202ENST00000392959 PBKQ96KB5 322 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
LCA5-202ENST00000392959 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 HSPA6P17066 643 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 GAP43P17677 238 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
LCA5-202ENST00000392959 LRCH2Q5VUJ6 765 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 ALS2CLQ60I27 953 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 LCORLQ8N3X6 602 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 FAM133AQ8N9E0 248 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 KLHL29Q96CT2 875 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 SLAIN2Q9P270 581 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 MFAP3LO75121 409 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 ARHGEF25Q86VW2 580 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 MCF2L2Q86YR7 1114 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 KRT31Q15323 416 aa14.28□□□□□ -0.12
LCA5-202ENST00000392959 TERF2Q15554 542 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms