RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SLU7O95391 586 aaKnown RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 NDUFB10O96000 172 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 GH2P01242 217 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 UBXN1Q04323 297 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 RRP1BQ14684 758 aaKnown RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 RBM26Q5T8P6 1007 aaKnown RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 RAD9BQ6WBX8 426 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 NOC3LQ8WTT2 800 aaKnown RBP28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 GJA10Q969M2 543 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 GMCL1Q96IK5 515 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 CSRNP1Q96S65 589 aa28.67■■■□□ 2.18
SMARCD3-203ENST00000392811 PSME4Q14997 1843 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 TMEM119Q4V9L6 283 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 CCDC93Q567U6 631 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 CNNM4Q6P4Q7 775 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 RAD54LQ92698 747 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 HPS3Q969F9 1004 aa28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 PDGFDQ9GZP0 370 aaPredicted RBP28.66■■■□□ 2.18
SMARCD3-203ENST00000392811 CSGALNACT2Q8N6G5 542 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 KIAA0895Q8NCT3 520 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 ERO1AQ96HE7 468 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 NAP1L4Q99733 375 aaKnown RBP28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 BICDL2A1A5D9 508 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 LGALS16A8MUM7 142 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 FECHP22830 423 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 PPP1R2P41236 205 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 SNAP25P60880 206 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 TRIM14Q14142 442 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 ANKRD40Q6AI12 368 aa28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 MAGEC2Q9UBF1 373 aaPredicted RBP28.65■■■□□ 2.18
SMARCD3-203ENST00000392811 RNF225M0QZC1 329 aaPredicted RBP28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 MARCH6O60337 910 aa28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 COBLL1Q53SF7 1204 aa28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 KCNK18Q7Z418 384 aa28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 MB21D1Q8N884 522 aa28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 ANO3Q9BYT9 981 aa28.64■■■□□ 2.18
SMARCD3-203ENST00000392811 CCDC175P0C221 793 aa28.64■■■□□ 2.17
SMARCD3-203ENST00000392811 RSBN1LQ6PCB5 846 aaPredicted RBP28.64■■■□□ 2.17
SMARCD3-203ENST00000392811 UNC13DQ70J99 1090 aa28.64■■■□□ 2.17
SMARCD3-203ENST00000392811 PDCL2Q8N4E4 241 aa28.64■■■□□ 2.17
SMARCD3-203ENST00000392811 PCDHA12Q9UN75 941 aa28.64■■■□□ 2.17
SMARCD3-203ENST00000392811 PVALEFA0A1B0GWK0 134 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 MEIS2O14770 477 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 ECM1Q16610 540 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 DYMQ7RTS9 669 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 TTLL6Q8N841 843 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 ZNF507Q8TCN5 953 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 AMNQ9BXJ7 453 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 MRPL44Q9H9J2 332 aaKnown RBP28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 SLC39A2Q9NP94 309 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 ABHD10Q9NUJ1 306 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 ADGRG1Q9Y653 693 aa28.63■■■□□ 2.17
SMARCD3-203ENST00000392811 SPDYE2BA6NHP3 402 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 TCP10L2B9ZVM9 353 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 SPDYE6P0CI01 402 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 USP11P51784 963 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 SYDE2Q5VT97 1194 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 RAD17O75943 681 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 IKQ13123 557 aaPredicted RBP28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 TMOD2Q9NZR1 351 aa28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 RGS17Q9UGC6 210 aaPredicted RBP28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 V9GYY5 206 aaPredicted RBP28.62■■■□□ 2.17
SMARCD3-203ENST00000392811 A0A1W2PRG0 241 aa28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 CLRN2A0PK11 232 aa28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 BMP3P12645 472 aa28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 FBXO11Q86XK2 927 aa28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 EEF2KMTQ96G04 330 aa28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.61■■■□□ 2.17
SMARCD3-203ENST00000392811 A0A1W2PQC6 194 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 GNG11P61952 73 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 AP3B2Q13367 1082 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 GRIPAP1Q4V328 841 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 RTKN2Q8IZC4 609 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 P2RX7Q99572 595 aaKnown RBP28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 SEMA6BQ9H3T3 888 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 HERC5Q9UII4 1024 aaKnown RBP28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 CYP3A7-CYP3A51PA0A087WV96 503 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 PSMD14O00487 310 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 PES1O00541 588 aaKnown RBP28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 CYP3A7P24462 503 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 POTEAQ6S8J7 498 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 UIMC1Q96RL1 719 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 WDR24Q96S15 920 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 TUBGCP2Q9BSJ2 902 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 KCNMB3Q9NPA1 279 aa28.6■■■□□ 2.17
SMARCD3-203ENST00000392811 USH1GQ495M9 461 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 TMTC1Q8IUR5 882 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 DDX12PQ92771 950 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 CNOT6LQ96LI5 555 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 MBOAT7Q96N66 472 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 GMLQ99445 158 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 PSMD1Q99460 953 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 LRRC27Q9C0I9 530 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 VIL1P09327 827 aaKnown RBP28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 PRKCSHP14314 528 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 KRT9P35527 623 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 ERVK-24P63145 666 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 CENPPQ6IPU0 288 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 BTNL9Q6UXG8 535 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms