RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 GYPCP04921 128 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 JAG1P78504 1218 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 CUL4BQ13620 913 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 FOXR1Q6PIV2 292 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 IQUBQ8NA54 791 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 VPS33BQ9H267 617 aa20.56■□□□□ 0.88
TRAF3-203ENST00000392745 COBLO75128 1261 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 ERLIN1O75477 346 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 GDF11O95390 407 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 RRP1BQ14684 758 aaKnown RBP20.55■□□□□ 0.88
TRAF3-203ENST00000392745 SEPT2Q15019 361 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 INF2Q27J81 1249 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 KANK3Q6NY19 840 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 SYMPKQ92797 1274 aaKnown RBP20.55■□□□□ 0.88
TRAF3-203ENST00000392745 RSPH14Q9UHP6 348 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 SLC16A2P36021 539 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 LEKR1Q6ZMV7 388 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 KCTD1Q719H9 257 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 ADGRF4Q8IZF3 695 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 MKL1Q969V6 931 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 KANSL2Q9H9L4 492 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 JMJD4Q9H9V9 463 aa20.55■□□□□ 0.88
TRAF3-203ENST00000392745 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
TRAF3-203ENST00000392745 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 CDKAL1Q5VV42 579 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 NIM1KQ8IY84 436 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 OGFOD1Q8N543 542 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 COA7Q96BR5 231 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 CSRNP1Q96S65 589 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 PPP1R1BQ9UD71 204 aaPredicted RBP20.54■□□□□ 0.88
TRAF3-203ENST00000392745 PHACTR2O75167 634 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 CXCL9Q07325 125 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 CASP8Q14790 479 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 NOA1Q8NC60 698 aaKnown RBP20.54■□□□□ 0.88
TRAF3-203ENST00000392745 NYAP2Q9P242 653 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 ZNF70Q9UC06 446 aaPredicted RBP20.54■□□□□ 0.88
TRAF3-203ENST00000392745 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
TRAF3-203ENST00000392745 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
TRAF3-203ENST00000392745 EIF3JO75822 258 aaKnown RBP20.53■□□□□ 0.88
TRAF3-203ENST00000392745 POLD1P28340 1107 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 ERVK-24P63145 666 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 C6orf50Q9HD87 102 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 RNF225M0QZC1 329 aaPredicted RBP20.53■□□□□ 0.88
TRAF3-203ENST00000392745 GNA11P29992 359 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 CDC25AP30304 524 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 CCT6AP40227 531 aaKnown RBP20.53■□□□□ 0.88
TRAF3-203ENST00000392745 ABCB5Q2M3G0 1257 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 NAPGQ99747 312 aaPredicted RBP20.53■□□□□ 0.88
TRAF3-203ENST00000392745 FER1L6Q2WGJ9 1857 aa20.53■□□□□ 0.88
TRAF3-203ENST00000392745 CTAGE15A4D2H0 777 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 PPP1R11O60927 126 aaPredicted RBP20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CTAGE8P0CG41 777 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 GPATCH4Q5T3I0 446 aaKnown RBP20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CTAGE6Q86UF2 777 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CTAGE4Q8IX94 777 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CCDC102AQ96A19 550 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 PAGE5Q96GU1 130 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 PPP1R3GB7ZBB8 358 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 RAD21O60216 631 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 DPYDQ12882 1025 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 TMEM179Q6ZVK1 233 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 CNGA4Q8IV77 575 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 PLCD3Q8N3E9 789 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 TMEM60Q9H2L4 133 aa20.52■□□□□ 0.88
TRAF3-203ENST00000392745 LRRIQ3A6PVS8 624 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 USP17L10C9JJH3 530 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 ARHGAP25P42331 645 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 TUBB2AQ13885 445 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 R3HDM1Q15032 1099 aaKnown RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 IPO4Q8TEX9 1081 aaKnown RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 TUBB2BQ9BVA1 445 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 TMOD2Q9NZR1 351 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 BIN2Q9UBW5 565 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 PNMA6FA0A0J9YX94 578 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 ICA1Q05084 483 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 SPDYE2Q495Y8 402 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 FILIP1LQ4L180 1135 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 ARL6IP4Q66PJ3 421 aaKnown RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 NCAPH2Q6IBW4 605 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 AGBL3Q8NEM8 1001 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 STAMQ92783 540 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 CTAGE1Q96RT6 745 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 CNTNAP1P78357 1384 aa20.51■□□□□ 0.87
TRAF3-203ENST00000392745 COL2A1P02458 1487 aaPredicted RBP20.51■□□□□ 0.87
TRAF3-203ENST00000392745 ESYT2A0FGR8 921 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 GH2P01242 217 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 TAOK3Q9H2K8 898 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 TMEM260Q9NX78 707 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 FECHP22830 423 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 WHAMMP3Q1A5X7 153 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 SLFN13Q68D06 897 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 KRT25Q7Z3Z0 450 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 SH3RF1Q7Z6J0 888 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 CDAN1Q8IWY9 1227 aa20.5■□□□□ 0.87
TRAF3-203ENST00000392745 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms