RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 RTP1P59025 263 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 FGD1P98174 961 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 DUSP28Q4G0W2 176 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 ARHGEF16Q5VV41 709 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 RAB11FIP4Q86YS3 637 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 SCFD2Q8WU76 684 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 RBM28Q9NW13 759 aaKnown RBP13.69□□□□□ -0.22
RFC4-202ENST00000392481 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
RFC4-202ENST00000392481 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
RFC4-202ENST00000392481 ELP1O95163 1332 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
RFC4-202ENST00000392481 ASGR1P07306 291 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 CPA1P15085 419 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
RFC4-202ENST00000392481 STXBP2Q15833 593 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 FSCN1Q16658 493 aaKnown RBP13.68□□□□□ -0.22
RFC4-202ENST00000392481 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
RFC4-202ENST00000392481 FBXL16Q8N461 479 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 PXMP2Q9NR77 195 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
RFC4-202ENST00000392481 ATP11BQ9Y2G3 1177 aa13.68□□□□□ -0.22
RFC4-202ENST00000392481 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 NKRFO15226 690 aaKnown RBP eCLIP13.67□□□□□ -0.22
RFC4-202ENST00000392481 NR3C2P08235 984 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
RFC4-202ENST00000392481 RPS6KB1P23443 525 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
RFC4-202ENST00000392481 PPP2R5BQ15173 497 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 RTN1Q16799 776 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 TRIM60Q495X7 471 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 TMEM63BQ5T3F8 832 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 Q6ZUG5 572 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
RFC4-202ENST00000392481 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 GOLGA8BA8MQT2 603 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 ZEB2O60315 1214 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
RFC4-202ENST00000392481 SYN1P17600 705 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
RFC4-202ENST00000392481 PTGS1P23219 599 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 BEX3Q00994 111 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 TLE2Q04725 743 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 CCDC82Q8N4S0 544 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 BRF1Q92994 677 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 PDCD2LQ9BRP1 358 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 PRO3102Q9H379 93 aa13.66□□□□□ -0.22
RFC4-202ENST00000392481 KIAA1217Q5T5P2 1943 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 CABYRO75952 493 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 TXNP10599 105 aaKnown RBP13.65□□□□□ -0.22
RFC4-202ENST00000392481 APOBRQ0VD83 1088 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 FUT2Q10981 343 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
RFC4-202ENST00000392481 CCDC62Q6P9F0 684 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 VSIG10LQ86VR7 867 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 GDF15Q99988 308 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 CNTNAP5Q8WYK1 1306 aa13.65□□□□□ -0.22
RFC4-202ENST00000392481 CCDC196A0A1B0GTZ2 297 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 hCG_1642624A0A1W2PR95 340 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 EIF5BO60841 1220 aaKnown RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 BMP8BP34820 402 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 MAGEA10P43363 369 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 CPT1AP50416 773 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 CXCL17Q6UXB2 119 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 SEPT14Q6ZU15 432 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 ANKRD33Q7Z3H0 272 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 OR6J1Q8NGC5 347 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 CUL5Q93034 780 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 TOX2Q96NM4 488 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 FAM217BQ9NTX9 383 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 FRMPD4Q14CM0 1322 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 ARVCFO00192 962 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 MEIS2O14770 477 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 PQBP1O60828 265 aaKnown RBP13.64□□□□□ -0.23
RFC4-202ENST00000392481 ARIH2O95376 493 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 CCND2P30279 289 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.23
RFC4-202ENST00000392481 CDK7P50613 346 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 EVCP57679 992 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 PGM5Q15124 567 aa13.64□□□□□ -0.23
RFC4-202ENST00000392481 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms