RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 ARHGEF16Q5VV41 709 aa29.1■■■□□ 2.25
HOMER3-202ENST00000392351 REXO1Q8N1G1 1221 aaKnown RBP29.1■■■□□ 2.25
HOMER3-202ENST00000392351 TINF2Q9BSI4 451 aa29.1■■■□□ 2.25
HOMER3-202ENST00000392351 PXMP2Q9NR77 195 aa29.1■■■□□ 2.25
HOMER3-202ENST00000392351 PCDHA4Q9UN74 947 aa29.1■■■□□ 2.25
HOMER3-202ENST00000392351 DDX49Q9Y6V7 483 aaKnown RBP29.1■■■□□ 2.25
HOMER3-202ENST00000392351 SPDYE3A6NKU9 549 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 HMGCRP04035 888 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 HSP90AA1P07900 732 aaKnown RBP29.09■■■□□ 2.25
HOMER3-202ENST00000392351 EIF2AK2P19525 551 aaKnown RBP29.09■■■□□ 2.25
HOMER3-202ENST00000392351 CLK2P49760 499 aaKnown RBP29.09■■■□□ 2.25
HOMER3-202ENST00000392351 NPY5RQ15761 445 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 MAMDC4Q6UXC1 1216 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 SH3TC2Q8TF17 1288 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 MCOLN1Q9GZU1 580 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 TMEM260Q9NX78 707 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 ASB14A6NK59 587 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 CYP2C19P33261 490 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 JAKMIP3Q5VZ66 844 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 KRT40Q6A162 431 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 GALNT17Q6IS24 598 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 ARMCX2Q7L311 632 aa29.09■■■□□ 2.25
HOMER3-202ENST00000392351 MSL3Q8N5Y2 521 aaKnown RBP29.09■■■□□ 2.25
HOMER3-202ENST00000392351 SYNGAP1Q96PV0 1343 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 IGHA2P01877 340 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 BECN1Q14457 450 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 MFSD14CQ5VZR4 134 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 BLIDQ8IZY5 108 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 DAGLBQ8NCG7 672 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 RASGRP4Q8TDF6 673 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 MPHOSPH6Q99547 160 aaKnown RBP29.08■■■□□ 2.25
HOMER3-202ENST00000392351 PCDHA6Q9UN73 950 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 PCDHA8Q9Y5H6 950 aa29.08■■■□□ 2.25
HOMER3-202ENST00000392351 UBXN2AP68543 259 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 GUCY1B3Q02153 619 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 TRIM32Q13049 653 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 AP3B2Q13367 1082 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 PGBD1Q96JS3 809 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 MYH7BA7E2Y1 1941 aa29.07■■■□□ 2.24
HOMER3-202ENST00000392351 LOC102724159A0A0B4J2E5 919 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 FOSP01100 380 aaPredicted RBP29.06■■■□□ 2.24
HOMER3-202ENST00000392351 MMP1P03956 469 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 INHAP05111 366 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 PWP2Q15269 919 aaKnown RBP29.06■■■□□ 2.24
HOMER3-202ENST00000392351 PDCD2LQ9BRP1 358 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 ANO3Q9BYT9 981 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 FRMPD4Q14CM0 1322 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 RPTORQ8N122 1335 aa29.06■■■□□ 2.24
HOMER3-202ENST00000392351 B4DLN1 442 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 PGM5Q15124 567 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 FBXO18Q8NFZ0 1043 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 IWS1Q96ST2 819 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.05■■■□□ 2.24
HOMER3-202ENST00000392351 SNAI1O95863 264 aaPredicted RBP29.05■■■□□ 2.24
HOMER3-202ENST00000392351 EDNRBP24530 442 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 PDE4DQ08499 809 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 IL31RAQ8NI17 732 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 MORC4Q8TE76 937 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 EHMT1Q9H9B1 1298 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 BRMS1Q9HCU9 246 aa29.05■■■□□ 2.24
HOMER3-202ENST00000392351 KIAA1217Q5T5P2 1943 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 NR3C2P08235 984 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 PRKAR2AP13861 404 aaKnown RBP29.04■■■□□ 2.24
HOMER3-202ENST00000392351 KRT2P35908 639 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 CACNB2Q08289 660 aaPredicted RBP29.04■■■□□ 2.24
HOMER3-202ENST00000392351 MCTP2Q6DN12 878 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 TNS4Q8IZW8 715 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 SPRYD3Q8NCJ5 442 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 OXER1Q8TDS5 423 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 CNPY2Q9Y2B0 182 aa29.04■■■□□ 2.24
HOMER3-202ENST00000392351 M0R2N6 131 aa29.03■■■□□ 2.24
HOMER3-202ENST00000392351 MYCLP12524 364 aaPredicted RBP29.02■■■□□ 2.24
HOMER3-202ENST00000392351 EEPD1Q7L9B9 569 aa29.02■■■□□ 2.24
HOMER3-202ENST00000392351 DIS3L2Q8IYB7 885 aaKnown RBP29.02■■■□□ 2.24
HOMER3-202ENST00000392351 CCND2P30279 289 aa29.01■■■□□ 2.24
HOMER3-202ENST00000392351 SAFBQ15424 915 aaKnown RBP eCLIP29.01■■■□□ 2.24
HOMER3-202ENST00000392351 STXBP2Q15833 593 aa29.01■■■□□ 2.24
HOMER3-202ENST00000392351 PRAMEF19Q5SWL8 479 aa29.01■■■□□ 2.24
HOMER3-202ENST00000392351 LARP1BQ659C4 914 aaKnown RBP29.01■■■□□ 2.24
HOMER3-202ENST00000392351 ABHD16BQ9H3Z7 469 aa29.01■■■□□ 2.24
HOMER3-202ENST00000392351 CYBAP13498 195 aa29.01■■■□□ 2.23
HOMER3-202ENST00000392351 NR5A1Q13285 461 aa29.01■■■□□ 2.23
HOMER3-202ENST00000392351 MAP3K21Q5TCX8 1036 aa29.01■■■□□ 2.23
HOMER3-202ENST00000392351 IFFO2Q5TF58 517 aa29.01■■■□□ 2.23
HOMER3-202ENST00000392351 FBXO16Q8IX29 292 aaPredicted RBP29.01■■■□□ 2.23
HOMER3-202ENST00000392351 ZHX1Q9UKY1 873 aaPredicted RBP29.01■■■□□ 2.23
HOMER3-202ENST00000392351 BTBD18B2RXH4 712 aa29■■■□□ 2.23
HOMER3-202ENST00000392351 SREBF1P36956 1147 aa29■■■□□ 2.23
HOMER3-202ENST00000392351 PCNX4Q63HM2 1172 aa29■■■□□ 2.23
HOMER3-202ENST00000392351 VSIG10LQ86VR7 867 aa29■■■□□ 2.23
HOMER3-202ENST00000392351 H3BQV1 296 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 MYCP01106 439 aaPredicted RBP28.99■■■□□ 2.23
HOMER3-202ENST00000392351 ANP32AP39687 249 aaKnown RBP28.99■■■□□ 2.23
HOMER3-202ENST00000392351 ACVR2BQ13705 512 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 KRT25Q7Z3Z0 450 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 TRPV1Q8NER1 839 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 ARMC5Q96C12 935 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 ZFP91Q96JP5 570 aaPredicted RBP28.99■■■□□ 2.23
HOMER3-202ENST00000392351 KATNBL1Q9H079 304 aa28.99■■■□□ 2.23
HOMER3-202ENST00000392351 NRBP1Q9UHY1 535 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms