RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 AXIN2Q9Y2T1 843 aa3.84□□□□□ -1.79
TRAV39-201ENST00000390466 RIPOR2Q9Y4F9 1068 aa3.84□□□□□ -1.79
TRAV39-201ENST00000390466 HYOU1Q9Y4L1 999 aa3.84□□□□□ -1.79
TRAV39-201ENST00000390466 ATP8B3O60423 1300 aa3.84□□□□□ -1.79
TRAV39-201ENST00000390466 FAM205AQ6ZU69 1335 aa3.84□□□□□ -1.79
TRAV39-201ENST00000390466 ARID2Q68CP9 1835 aa3.84□□□□□ -1.8
TRAV39-201ENST00000390466 BRWD3Q6RI45 1802 aa3.84□□□□□ -1.8
TRAV39-201ENST00000390466 TANC1Q9C0D5 1861 aa3.84□□□□□ -1.8
TRAV39-201ENST00000390466 SMCHD1A6NHR9 2005 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 A6NHS1 94 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 GSG1L2A8MUP6 293 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 H7C1D1 291 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 M0R2N6 131 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF213O14771 459 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 IFIT3O14879 490 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PLSCR1O15162 318 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 MAP3K13O43283 966 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NCK2O43639 380 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 KRT86O43790 486 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TLR2O60603 784 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SMNDC1O75940 238 aaKnown RBP eCLIP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RHOBTB3O94955 611 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 MOCS3O95396 460 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 BMP15O95972 392 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RPN1P04843 607 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 GSTA1P08263 222 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 FGRP09769 529 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 IDEP14735 1019 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ERCC3P19447 782 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CYLC1P35663 651 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ABL2P42684 1182 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 DNM2P50570 870 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ATP1A2P50993 1020 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 KRT83P78385 493 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 POU5F1Q01860 360 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CYP27A1Q02318 531 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 UBXN1Q04323 297 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ICA1Q05084 483 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 IFT88Q13099 833 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PAK2Q13177 524 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM28Q13263 835 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SEMA3FQ13275 785 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SAFBQ15424 915 aaKnown RBP eCLIP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SNCBQ16143 134 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SLC35G1Q2M3R5 365 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NBPF20Q3BBV1 942 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TNFAIP8L3Q5GJ75 292 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TMEM67Q5HYA8 995 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RRP12Q5JTH9 1297 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CEP85LQ5SZL2 805 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RRAGBQ5VZM2 374 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 KCTD16Q68DU8 428 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PDXDC1Q6P996 788 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 FOXR2Q6PJQ5 311 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PARP9Q8IXQ6 854 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF654Q8IZM8 581 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC155Q8N6L0 562 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 OTUD6BQ8N6M0 293 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ANKLE1Q8NAG6 615 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RETREG2Q8NC44 543 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 KCNH5Q8NCM2 988 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 GIMAP8Q8ND71 665 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM58Q8NG06 486 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 WHAMMQ8TF30 809 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ATP8B4Q8TF62 1192 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SCFD2Q8WU76 684 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ATXN2LQ8WWM7 1075 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 RAPGEF5Q92565 580 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 STAMQ92783 540 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 P3H4Q92791 437 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 HOOK2Q96ED9 719 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 STAMBPL1Q96FJ0 436 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC43Q96MW1 224 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF570Q96NI8 536 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NEUROD6Q96NK8 337 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 BLZF1Q9H2G9 400 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TAF1DQ9H5J8 278 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC134Q9H6E4 229 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NHEJ1Q9H9Q4 299 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 KBTBD4Q9NVX7 518 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CWC25Q9NXE8 425 aaPredicted RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SLC5A4Q9NY91 659 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 TSKSQ9UJT2 592 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 ANAPC4Q9UJX5 808 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 NFU1Q9UMS0 254 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PLAGL2Q9UPG8 496 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 LUC7L2Q9Y383 392 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC9Q9Y3X0 531 aaKnown RBP3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PCDHGC5Q9Y5F6 944 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 AFF2P51816 1311 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 PNPLA7Q6ZV29 1317 aa3.83□□□□□ -1.8
TRAV39-201ENST00000390466 SIPA1L1O43166 1804 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ABCB11O95342 1321 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ZNF532Q9HCE3 1301 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 SSU72P8A0A1W2PR75 194 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 ESYT3A0FGR9 886 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 GRID2IPA4D2P6 1211 aa3.82□□□□□ -1.8
TRAV39-201ENST00000390466 NUTM2BA6NNL0 878 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms