RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TMED8Q6PL24 325 aaPredicted RBP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 NLRP8Q86W28 1048 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 TICAM2Q86XR7 235 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 AGBL3Q8NEM8 1001 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 TIGD1Q96MW7 591 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 DACH1Q9UI36 760 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 GJA3Q9Y6H8 435 aa8.65□□□□□ -1.02
TRBV28-201ENST00000390400 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 MORC2Q9Y6X9 1032 aaPredicted RBP8.65□□□□□ -1.02
TRBV28-201ENST00000390400 RAD50Q92878 1312 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 A0A0U1RQG5 324 aaPredicted RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 F8W031 263 aaPredicted RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 RNF113AO15541 343 aaKnown RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 RPS12P25398 132 aaKnown RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 ST13P50502 369 aaKnown RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 MECOMQ03112 1051 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 GRIK5Q16478 980 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 CCDC183Q5T5S1 534 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 SLC9C2Q5TAH2 1124 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 NAA16Q6N069 864 aaPredicted RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 GIMAP6Q6P9H5 292 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 HS2ST1Q7LGA3 356 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 GPC2Q8N158 579 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 MAGEB6Q8N7X4 407 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 KBTBD4Q9NVX7 518 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 TMEM51Q9NW97 253 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
TRBV28-201ENST00000390400 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
TRBV28-201ENST00000390400 WDR33Q9C0J8 1336 aaKnown RBP8.63□□□□□ -1.03
TRBV28-201ENST00000390400 ZNF532Q9HCE3 1301 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 DCDC2BA2VCK2 349 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 TULP2O00295 520 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 LDHCP07864 332 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 EPB42P16452 691 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 CYP7A1P22680 504 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 MCCP23508 829 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 CHMLP26374 656 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 ADD2P35612 726 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 GMPSP49915 693 aaPredicted RBP8.63□□□□□ -1.03
TRBV28-201ENST00000390400 MMP14P50281 582 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 TNP2Q05952 138 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 PAK2Q13177 524 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 UBE3CQ15386 1083 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 MCF2L2Q86YR7 1114 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 KIAA0825Q8IV33 1275 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 KRT222Q8N1A0 295 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 OR13H1Q8NG92 308 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 KIAA1524Q8TCG1 905 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 NSUN4Q96CB9 384 aaKnown RBP8.63□□□□□ -1.03
TRBV28-201ENST00000390400 HHIPQ96QV1 700 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 TCF12Q99081 682 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 EFCC1Q9HA90 598 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 KCND1Q9NSA2 647 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 HDAC9Q9UKV0 1011 aa8.63□□□□□ -1.03
TRBV28-201ENST00000390400 ZHX1Q9UKY1 873 aaPredicted RBP8.63□□□□□ -1.03
TRBV28-201ENST00000390400 NAP1L2Q9ULW6 460 aaPredicted RBP8.63□□□□□ -1.03
TRBV28-201ENST00000390400 CCDC171Q6TFL3 1326 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 TCRBV5S4A2TA0A5A2 114 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
TRBV28-201ENST00000390400 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
TRBV28-201ENST00000390400 ZMYM1Q5SVZ6 1142 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 TTC39BQ5VTQ0 682 aaPredicted RBP8.62□□□□□ -1.03
TRBV28-201ENST00000390400 CWC27Q6UX04 472 aaKnown RBP8.62□□□□□ -1.03
TRBV28-201ENST00000390400 GPT2Q8TD30 523 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 ZNF384Q8TF68 577 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 APPBP2Q92624 585 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 DPF2Q92785 391 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 TEKT1Q969V4 418 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 SLC30A3Q99726 388 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 NOL10Q9BSC4 688 aaKnown RBP8.62□□□□□ -1.03
TRBV28-201ENST00000390400 MRIQ9BWK5 157 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 NDFIP2Q9NV92 336 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 ADAMTS1Q9UHI8 967 aa8.62□□□□□ -1.03
TRBV28-201ENST00000390400 MROH7-TTC4A0A0A0MT08 1334 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 GAKO14976 1311 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 GLTPD2A6NH11 291 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 H7C1D1 291 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
TRBV28-201ENST00000390400 ATP8B1O43520 1251 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 FBXO24O75426 580 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 DDNO94850 711 aaPredicted RBP8.61□□□□□ -1.03
TRBV28-201ENST00000390400 CHGBP05060 677 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 FGRP09769 529 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 FAM157BP0CG42 384 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 CRKP46108 304 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 GJA8P48165 433 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 RBM5P52756 815 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRBV28-201ENST00000390400 FCGRTP55899 365 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 ZNF280AP59817 542 aaPredicted RBP8.61□□□□□ -1.03
TRBV28-201ENST00000390400 CCINQ13939 588 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 DBN1Q16643 649 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 CFAP100Q494V2 611 aa8.61□□□□□ -1.03
TRBV28-201ENST00000390400 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms