RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 MTG1Q9BT17 334 aaPredicted RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 IL25Q9H293 177 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 MAD2L2Q9UI95 211 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 E7EWF7 191 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 GRIN2DO15399 1336 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 SMARCA1P28370 1054 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 PURAQ00577 322 aaKnown RBP15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 ARHGEF16Q5VV41 709 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 NFRKBQ6P4R8 1299 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 TAAR1Q96RJ0 339 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 CPVLQ9H3G5 476 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 HIPK3Q9H422 1215 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
TRBV4-1-201ENST00000390357 KIAA1217Q5T5P2 1943 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 HSD17B4P51659 736 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 EPHB4P54760 987 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 GRM4Q14833 912 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 TMEM240Q5SV17 173 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 CCDC62Q6P9F0 684 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 STAG2Q8N3U4 1231 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 IL23AQ9NPF7 189 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 PCDHA1Q9Y5I3 950 aa15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 DDX49Q9Y6V7 483 aaKnown RBP15.8■□□□□ 0.12
TRBV4-1-201ENST00000390357 B4GALT4O60513 344 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 CFBP00751 764 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 GH1P01241 217 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 FGBP02675 491 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 PFKMP08237 780 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 MYL3P08590 195 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 CSF2RAP15509 400 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 IRX6P78412 446 aaPredicted RBP15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 TROAPQ12815 778 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 TMEM63BQ5T3F8 832 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 STOX1Q6ZVD7 989 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 IGDCC4Q8TDY8 1250 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 TBC1D5Q92609 795 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 LZTS2Q9BRK4 669 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 PPP1R12CQ9BZL4 782 aa15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
TRBV4-1-201ENST00000390357 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 NR3C2P08235 984 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 TGFB3P10600 412 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 CASTP20810 708 aaKnown RBP15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 TMEM67Q5HYA8 995 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 RASIP1Q5U651 963 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 CASC1Q6TDU7 716 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 ZNF365Q70YC5 407 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 C16orf59Q7L2K0 433 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 TMEM87BQ96K49 555 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 PXMP2Q9NR77 195 aa15.78■□□□□ 0.12
TRBV4-1-201ENST00000390357 GCOM1H8Y6P7 765 aaPredicted RBP15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 POLR2MP0CAP2 368 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 KIF5BP33176 963 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 CYP2C18P33260 490 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 MCM5P33992 734 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 GNAQP50148 359 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 PSMC6P62333 389 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 LAMC2Q13753 1193 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 SEPT14Q6ZU15 432 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 EMID1Q96A84 441 aaPredicted RBP15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 GUCD1Q96NT3 240 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 NOC4LQ9BVI4 516 aaKnown RBP15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 TRPV6Q9H1D0 765 aa15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 DDX41Q9UJV9 622 aaKnown RBP15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 RBM8AQ9Y5S9 174 aaKnown RBP15.77■□□□□ 0.12
TRBV4-1-201ENST00000390357 SCN10AQ9Y5Y9 1956 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 STAM2O75886 525 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CALM1P0DP23 149 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CALM2P0DP24 149 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CALM3P0DP25 149 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 RFC2P35250 354 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 DGKDQ16760 1214 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 NBPF20Q3BBV1 942 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CENPQQ7L2Z9 268 aaPredicted RBP15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 VSIG10LQ86VR7 867 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 SESTD1Q86VW0 696 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 MB21D2Q8IYB1 491 aaPredicted RBP15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CTCFLQ8NI51 663 aaPredicted RBP15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 CDX2Q99626 313 aaPredicted RBP15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 KATNAL1Q9BW62 490 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 COL20A1Q9P218 1284 aa15.76■□□□□ 0.11
TRBV4-1-201ENST00000390357 MYH7BA7E2Y1 1941 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 DDAH1O94760 285 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 ARIH2O95376 493 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 PARNO95453 639 aaKnown RBP15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 EIF2AK2P19525 551 aaKnown RBP15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 LIFRP42702 1097 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 BFSP2Q13515 415 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 RAB30Q15771 203 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 LY6KQ17RY6 165 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 RNF20Q5VTR2 975 aa15.75■□□□□ 0.11
TRBV4-1-201ENST00000390357 COPS5Q92905 334 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms