RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 THAP12O43422 761 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 ADD2P35612 726 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 SULF1Q8IWU6 871 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 HVCN1Q96D96 273 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 MYOCDQ8IZQ8 938 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 RSAD2Q8WXG1 361 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 EVI5O60447 810 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 ABCB4P21439 1286 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 PKP1Q13835 747 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 ADCY9O60503 1353 aa15.29■□□□□ 0.04
SNPH-201ENST00000381867 hCG_1984214I3L0E3 225 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 ZNF713Q8N859 430 aaPredicted RBP15.28■□□□□ 0.04
SNPH-201ENST00000381867 PCDHA7Q9UN72 937 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 RFX1P22670 979 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 SLC12A2P55011 1212 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 GUCY2DQ02846 1103 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 IFT88Q13099 833 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 USH1GQ495M9 461 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 REXO1Q8N1G1 1221 aaKnown RBP15.28■□□□□ 0.04
SNPH-201ENST00000381867 MRPL11Q9Y3B7 192 aaKnown RBP15.28■□□□□ 0.04
SNPH-201ENST00000381867 MMP10P09238 476 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 HSP90AA5PQ58FG0 334 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 SEC31BQ9NQW1 1179 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 RAB20Q9NX57 234 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 TPCN1Q9ULQ1 816 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
SNPH-201ENST00000381867 MGEA5O60502 916 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 TTC19Q6DKK2 380 aaPredicted RBP15.28■□□□□ 0.04
SNPH-201ENST00000381867 MCF2L2Q86YR7 1114 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 KIAA0825Q8IV33 1275 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 BBOF1Q8ND07 529 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 AFG3L2Q9Y4W6 797 aa15.28■□□□□ 0.04
SNPH-201ENST00000381867 SMIM24O75264 130 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 ADORA1P30542 326 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 SRP68Q9UHB9 627 aaKnown RBP15.27■□□□□ 0.04
SNPH-201ENST00000381867 NDUFB9Q9Y6M9 179 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 PXDNLA1KZ92 1463 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 ARHGAP23Q9P227 1491 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 POLR1AO95602 1720 aaPredicted RBP15.27■□□□□ 0.04
SNPH-201ENST00000381867 FRMD3A2A2Y4 597 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 FGAP02671 866 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 CD19P15391 556 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 EPHB4P54760 987 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 DBN1Q16643 649 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 GPATCH4Q5T3I0 446 aaKnown RBP15.27■□□□□ 0.04
SNPH-201ENST00000381867 LRRC8CQ8TDW0 803 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 M0QZ92 97 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 SUPT20HL1Q3ZLR7 823 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 KCTD16Q68DU8 428 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 NLRX1Q86UT6 975 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 CCDC125Q86Z20 511 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 CDAN1Q8IWY9 1227 aa15.27■□□□□ 0.04
SNPH-201ENST00000381867 SLC35F6Q8N357 371 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 EXOC4Q96A65 974 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 THEGQ9P2T0 379 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 NDUFA8P51970 172 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 USP14P54578 494 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 ZNF827Q17R98 1081 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 TMCO4Q5TGY1 634 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 MAEAQ7L5Y9 396 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 EFCC1Q9HA90 598 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 INTS9Q9NV88 658 aaKnown RBP15.27■□□□□ 0.03
SNPH-201ENST00000381867 PALD1Q9ULE6 856 aa15.27■□□□□ 0.03
SNPH-201ENST00000381867 A0A1W2PQ27 194 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 A0A1W2PQ64 194 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 A0A1W2PQD8 194 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 CFBP00751 764 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 IFNB1P01574 187 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 ICA1Q05084 483 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 TNKSO95271 1327 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 PASKQ96RG2 1323 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 PROCA1Q8NCQ7 364 aaPredicted RBP15.26■□□□□ 0.03
SNPH-201ENST00000381867 PNMA1Q8ND90 353 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
SNPH-201ENST00000381867 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 H2AFZP0C0S5 128 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 ATF2P15336 505 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 H2AFVQ71UI9 128 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 NRBP1Q9UHY1 535 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 LPXNO60711 386 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 CNGA1P29973 690 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 FANCBQ8NB91 859 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 EDC3Q96F86 508 aaKnown RBP15.26■□□□□ 0.03
SNPH-201ENST00000381867 PLA2G12BQ9BX93 195 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
SNPH-201ENST00000381867 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
SNPH-201ENST00000381867 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
SNPH-201ENST00000381867 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
SNPH-201ENST00000381867 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
SNPH-201ENST00000381867 PRR16Q569H4 304 aa15.25■□□□□ 0.03
SNPH-201ENST00000381867 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms