RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PURAQ00577 322 aaKnown RBP16.52■□□□□ 0.24
SHOX-202ENST00000381575 SEC23AQ15436 765 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 DNERQ8NFT8 737 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 SYTL5Q8TDW5 730 aaPredicted RBP16.52■□□□□ 0.24
SHOX-202ENST00000381575 SCFD2Q8WU76 684 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 WNT8AQ9H1J5 351 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.24
SHOX-202ENST00000381575 SENP2Q9HC62 589 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 PNMA2Q9UL42 364 aa16.52■□□□□ 0.24
SHOX-202ENST00000381575 LOC102724159A0A0B4J2E5 919 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 TXNP10599 105 aaKnown RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 CYP2C9P11712 490 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 CPT1AP50416 773 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 PWP2Q15269 919 aaKnown RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 SEPT14Q6ZU15 432 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 SCLYQ96I15 445 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 IL23AQ9NPF7 189 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 POLR3EQ9NVU0 708 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 REV3LO60673 3130 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 TANC1Q9C0D5 1861 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 DOCK5Q9H7D0 1870 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 RAD50Q92878 1312 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 RBAK-RBAKDNI3L0D1 243 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 CYP21A2P08686 494 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 EIF2AK2P19525 551 aaKnown RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 SLC35G1Q2M3R5 365 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 CHST3Q7LGC8 479 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 MAFAQ8NHW3 353 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 GPHNQ9NQX3 736 aaPredicted RBP16.51■□□□□ 0.23
SHOX-202ENST00000381575 MAD2L2Q9UI95 211 aa16.51■□□□□ 0.23
SHOX-202ENST00000381575 KLRF2D3W0D1 207 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 OPLAHO14841 1288 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 PPP1R11O60927 126 aaPredicted RBP16.5■□□□□ 0.23
SHOX-202ENST00000381575 CFBP00751 764 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 FOSL2P15408 326 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 NT5C2P49902 561 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 LY6KQ17RY6 165 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 RASIP1Q5U651 963 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 STOX1Q6ZVD7 989 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 HOMER1Q86YM7 354 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 TIFAQ96CG3 184 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 RMDN3Q96TC7 470 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 MTG1Q9BT17 334 aaPredicted RBP16.5■□□□□ 0.23
SHOX-202ENST00000381575 PBX4Q9BYU1 374 aa16.5■□□□□ 0.23
SHOX-202ENST00000381575 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
SHOX-202ENST00000381575 TRANK1O15050 2925 aa16.49■□□□□ 0.23
SHOX-202ENST00000381575 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
SHOX-202ENST00000381575 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHOX-202ENST00000381575 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
SHOX-202ENST00000381575 ZNF576Q9H609 170 aa16.49■□□□□ 0.23
SHOX-202ENST00000381575 A6NJR5 290 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 B4DLN1 442 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 E7EWF7 191 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
SHOX-202ENST00000381575 NKRFO15226 690 aaKnown RBP eCLIP16.48■□□□□ 0.23
SHOX-202ENST00000381575 SORBS3O60504 671 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 HOXA13P31271 388 aaPredicted RBP16.48■□□□□ 0.23
SHOX-202ENST00000381575 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
SHOX-202ENST00000381575 TRDNQ13061 729 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 ARHGEF16Q5VV41 709 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 MCF2L2Q86YR7 1114 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 NSUN6Q8TEA1 469 aaKnown RBP16.48■□□□□ 0.23
SHOX-202ENST00000381575 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 VWCEQ96DN2 955 aa16.48■□□□□ 0.23
SHOX-202ENST00000381575 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
SHOX-202ENST00000381575 SPTBN5Q9NRC6 3674 aaKnown RBP16.47■□□□□ 0.23
SHOX-202ENST00000381575 SGSM2O43147 1006 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 FGBP02675 491 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 GRM4Q14833 912 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 BRDTQ58F21 947 aaPredicted RBP16.47■□□□□ 0.23
SHOX-202ENST00000381575 DEFB128Q7Z7B8 93 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
SHOX-202ENST00000381575 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 ZFP91Q96JP5 570 aaPredicted RBP16.47■□□□□ 0.23
SHOX-202ENST00000381575 PIGSQ96S52 555 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 AMNQ9BXJ7 453 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 PTPRSQ13332 1948 aa16.47■□□□□ 0.23
SHOX-202ENST00000381575 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
SHOX-202ENST00000381575 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
SHOX-202ENST00000381575 ZBBXA8MT70 800 aa16.46■□□□□ 0.23
SHOX-202ENST00000381575 ZBTB5O15062 677 aa16.46■□□□□ 0.23
SHOX-202ENST00000381575 MMP3P08254 477 aa16.46■□□□□ 0.23
SHOX-202ENST00000381575 RABGGTBP53611 331 aa16.46■□□□□ 0.23
SHOX-202ENST00000381575 ANTXR2P58335 489 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms