RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TRMT44Q8IYL2 757 aaKnown RBP17.73■□□□□ 0.43
PDGFB-202ENST00000381551 BLIDQ8IZY5 108 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 MSL3Q8N5Y2 521 aaKnown RBP17.73■□□□□ 0.43
PDGFB-202ENST00000381551 TINF2Q9BSI4 451 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
PDGFB-202ENST00000381551 LOC102724159A0A0B4J2E5 919 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 MMP1P03956 469 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 ELNP15502 786 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
PDGFB-202ENST00000381551 FOSBP53539 338 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 PWP2Q15269 919 aaKnown RBP17.72■□□□□ 0.43
PDGFB-202ENST00000381551 ARHGEF16Q5VV41 709 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 JAKMIP3Q5VZ66 844 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 MCTP2Q6DN12 878 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 FBXO46Q6PJ61 603 aaPredicted RBP17.72■□□□□ 0.43
PDGFB-202ENST00000381551 REXO1Q8N1G1 1221 aaKnown RBP17.72■□□□□ 0.43
PDGFB-202ENST00000381551 MORC4Q8TE76 937 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 TRIB2Q92519 343 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 PXMP2Q9NR77 195 aa17.72■□□□□ 0.43
PDGFB-202ENST00000381551 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 LCTP09848 1927 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 ASB14A6NK59 587 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 SNAI1O95863 264 aaPredicted RBP17.71■□□□□ 0.43
PDGFB-202ENST00000381551 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
PDGFB-202ENST00000381551 GRK4P32298 578 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 GUCY1B3Q02153 619 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 AP3B2Q13367 1082 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
PDGFB-202ENST00000381551 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 RASGRP4Q8TDF6 673 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
PDGFB-202ENST00000381551 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
PDGFB-202ENST00000381551 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
PDGFB-202ENST00000381551 RPTORQ8N122 1335 aa17.71■□□□□ 0.42
PDGFB-202ENST00000381551 B4DLN1 442 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 SLC34A2O95436 690 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 NR3C2P08235 984 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 EIF2AK2P19525 551 aaKnown RBP17.7■□□□□ 0.42
PDGFB-202ENST00000381551 EDNRBP24530 442 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 CYP2C19P33261 490 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 VSIG10LQ86VR7 867 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 SLAIN1Q8ND83 568 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 PDCD2LQ9BRP1 358 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 RBBP6Q7Z6E9 1792 aaKnown RBP17.7■□□□□ 0.42
PDGFB-202ENST00000381551 FRMPD4Q14CM0 1322 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 SYNGAP1Q96PV0 1343 aa17.7■□□□□ 0.42
PDGFB-202ENST00000381551 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 KRT2P35908 639 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 UBXN2AP68543 259 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 TRIM32Q13049 653 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 PGM5Q15124 567 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 MFSD14CQ5VZR4 134 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 ARMCX2Q7L311 632 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 DIS3L2Q8IYB7 885 aaKnown RBP17.69■□□□□ 0.42
PDGFB-202ENST00000381551 TNFRSF25Q93038 417 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
PDGFB-202ENST00000381551 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
PDGFB-202ENST00000381551 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.69■□□□□ 0.42
PDGFB-202ENST00000381551 HMGCRP04035 888 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 PDCP20941 246 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 SYT1P21579 422 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 PDE4DQ08499 809 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 NR5A1Q13285 461 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 SAFBQ15424 915 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDGFB-202ENST00000381551 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 KATNBL1Q9H079 304 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 BRMS1Q9HCU9 246 aa17.68■□□□□ 0.42
PDGFB-202ENST00000381551 H3BQV1 296 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 EIF3JO75822 258 aaKnown RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 MYCLP12524 364 aaPredicted RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 SREBF1P36956 1147 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 ANP32AP39687 249 aaKnown RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 CACNB2Q08289 660 aaPredicted RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 STXBP2Q15833 593 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 MAP3K21Q5TCX8 1036 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 PCNX4Q63HM2 1172 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 XRRA1Q6P2D8 792 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 KRT25Q7Z3Z0 450 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 MCOLN1Q9GZU1 580 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 FOXP1Q9H334 677 aaPredicted RBP17.67■□□□□ 0.42
PDGFB-202ENST00000381551 ABHD16BQ9H3Z7 469 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 EHMT1Q9H9B1 1298 aa17.67■□□□□ 0.42
PDGFB-202ENST00000381551 HTTP42858 3142 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 EDIL3O43854 480 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 INHAP05111 366 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.42
PDGFB-202ENST00000381551 CCND2P30279 289 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 ACVR2BQ13705 512 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 SLC9C1Q4G0N8 1177 aa17.66■□□□□ 0.42
PDGFB-202ENST00000381551 EARS2Q5JPH6 523 aaKnown RBP17.66■□□□□ 0.42
PDGFB-202ENST00000381551 TRPV1Q8NER1 839 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms