RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TRIM75PA6NK02 468 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TULP2O00295 520 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MMP14P50281 582 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ALCAMQ13740 583 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 UNC13DQ70J99 1090 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CNKSR1Q969H4 720 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 KIAA1468Q9P260 1216 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ZNF215Q9UL58 517 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC124Q96CT7 223 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PITPNM2Q9BZ72 1349 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MAP3K7O43318 606 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 FANCCQ00597 558 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TMEM259Q4ZIN3 620 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TMEM67Q5HYA8 995 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ESR2Q92731 530 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DHTKD1Q96HY7 919 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CATSPER2Q96P56 530 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TIMMDC1Q9NPL8 285 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DACT1Q9NYF0 836 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ADAM21Q9UKJ8 722 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DUOX1Q9NRD9 1551 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SPDYE3A6NKU9 549 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TBKBP1A7MCY6 615 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MEFVO15553 781 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CHMLP26374 656 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CLCN6P51797 869 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SLC39A6Q13433 755 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DLGAP5Q15398 846 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 TSGA10IPQ3SY00 556 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 RBM43Q6ZSC3 357 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PARP9Q8IXQ6 854 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 IGSF22Q8N9C0 903 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MXD3Q9BW11 206 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 RSL24D1Q9UHA3 163 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MIF4GDA9UHW6 222 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 NOP56O00567 594 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SKIV2L2P42285 1042 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 KPNA2P52292 529 aaKnown RBP5.32□□□□□ -1.56
PTPRD-203ENST00000381196 KLC3Q6P597 504 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 ZNF662Q6ZS27 426 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 C2CD5Q86YS7 1000 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 PROM2Q8N271 834 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC63Q8NA47 563 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 DTX3LQ8TDB6 740 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 MBIPQ9NS73 344 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 SH3TC1Q8TE82 1336 aa5.32□□□□□ -1.56
PTPRD-203ENST00000381196 A0A1W2PQC6 194 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 DDIT3P35638 169 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PDE1BQ01064 536 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CYLC2Q14093 348 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SH3TC2Q8TF17 1288 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 FRMD8Q9BZ67 464 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 ETAA1Q9NY74 926 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SLC4A7Q9Y6M7 1214 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PFDN1O60925 122 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PYGBP11216 843 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PRLRP16471 622 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 RPS6KB1P23443 525 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 RPL22P35268 128 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 RIPK1Q13546 671 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 NLGN1Q8N2Q7 840 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC8Q9H0W5 538 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CBX8Q9HC52 389 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SYNGAP1Q96PV0 1343 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 GOLGA8MH3BSY2 632 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 TADA3O75528 432 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 GCP02774 474 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 GNA11P29992 359 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 AOPEPQ8N6M6 819 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 GPR108Q9NPR9 543 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 AIPL1Q9NZN9 384 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SUFUQ9UMX1 484 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PCDHB15Q9Y5E8 787 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SLC4A4Q9Y6R1 1079 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PFASO15067 1338 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 TECPR2O15040 1411 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 FAM204AQ9H8W3 233 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 MRFAP1Q9Y605 127 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PODXLO00592 558 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PFKFB2O60825 505 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 KRT6AP02538 564 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 KRT6BP04259 564 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 H2AFXP16104 143 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 HDAC4P56524 1084 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 NYAP1Q6ZVC0 841 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 HDDC2Q7Z4H3 204 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 DSEQ9UL01 958 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 NCOR1O75376 2440 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 EIF3HO15372 352 aaKnown RBP eCLIP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 KCNA4P22459 653 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 IL15P40933 162 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CUL4BQ13620 913 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 MCMDC2Q4G0Z9 681 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PDXDC1Q6P996 788 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 OR8K1Q8NGG5 319 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms