RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.05
SDC1-202ENST00000381150 PSMD14O00487 310 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 TACC1O75410 805 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 CPP00450 1065 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 STAT6P42226 847 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 ARID5AQ03989 594 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 NAA25Q14CX7 972 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 CCNL1Q9UK58 526 aaPredicted RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 RTCBQ9Y3I0 505 aaKnown RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 MEFVO15553 781 aaPredicted RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 KRT2P35908 639 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 PSEN1P49768 467 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 TDRD12Q587J7 1177 aaKnown RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 SPATA4Q8NEY3 305 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 IFIH1Q9BYX4 1025 aaKnown RBP15.37■□□□□ 0.05
SDC1-202ENST00000381150 EPB41L5Q9HCM4 733 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 USO1O60763 962 aaKnown RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 SKAP2O75563 359 aaPredicted RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 SWT1Q5T5J6 900 aaKnown RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 CCDC121Q6ZUS5 278 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 MICALCLQ6ZW33 695 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 KLHL7Q8IXQ5 586 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 PPP1R12BO60237 982 aaPredicted RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 PMS1P54277 932 aaKnown RBP15.36■□□□□ 0.05
SDC1-202ENST00000381150 CCDC178Q5BJE1 867 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 TTC38Q5R3I4 469 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 CSGALNACT2Q8N6G5 542 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 TANGO6Q9C0B7 1094 aa15.36■□□□□ 0.05
SDC1-202ENST00000381150 GOLGA6L10A6NI86 522 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 PP2D1A8MPX8 630 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 NMT2O60551 498 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 NLRP5P59047 1200 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 CCDC40Q4G0X9 1142 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 CLGNO14967 610 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 RPN1P04843 607 aaKnown RBP15.35■□□□□ 0.05
SDC1-202ENST00000381150 CYP2D6P10635 497 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 PDHBP11177 359 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 CARSP49589 748 aaKnown RBP15.35■□□□□ 0.05
SDC1-202ENST00000381150 CLNS1AP54105 237 aaKnown RBP15.35■□□□□ 0.05
SDC1-202ENST00000381150 TRIM14Q14142 442 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 KLC4Q9NSK0 619 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 GRIN2DO15399 1336 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 GBP2P32456 591 aaPredicted RBP15.35■□□□□ 0.05
SDC1-202ENST00000381150 LSP1P33241 339 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 TMED8Q6PL24 325 aaPredicted RBP15.35■□□□□ 0.05
SDC1-202ENST00000381150 CATIPQ7Z7H3 387 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 OR2W6PQ8NHA6 318 aa15.35■□□□□ 0.05
SDC1-202ENST00000381150 XDHP47989 1333 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 FAM153BP0C7A2 387 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 FAM153CQ494X1 144 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 SRBD1Q8N5C6 995 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 RBM28Q9NW13 759 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 FAM153AQ9UHL3 310 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 PACSIN2Q9UNF0 486 aaPredicted RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 DDAH1O94760 285 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 NR1D1P20393 614 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 NEDD9Q14511 834 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 WDR59Q6PJI9 974 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 RASGRP4Q8TDF6 673 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 NOC4LQ9BVI4 516 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 CRNKL1Q9BZJ0 848 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 VEZTQ9HBM0 779 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 LIMA1Q9UHB6 759 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 CALM1P0DP23 149 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 CALM2P0DP24 149 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 CALM3P0DP25 149 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 MSL3Q8N5Y2 521 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 RPGRIP1Q96KN7 1286 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 TUBGCP2Q9BSJ2 902 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 RBM12Q9NTZ6 932 aaKnown RBP15.34■□□□□ 0.05
SDC1-202ENST00000381150 STIM2Q9P246 746 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 RWDD2AQ9UIY3 292 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 USP21Q9UK80 565 aa15.34■□□□□ 0.05
SDC1-202ENST00000381150 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.05
SDC1-202ENST00000381150 TARSL2A2RTX5 802 aaKnown RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 HEXIM1O94992 359 aaKnown RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 TRADDQ15628 312 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 FAM47AQ5JRC9 791 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 PAPD7Q5XG87 772 aaKnown RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 ZNF473Q8WTR7 871 aaKnown RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 ZKSCAN4Q969J2 545 aaPredicted RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 ALS2CR12Q96Q35 445 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms