RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PDIA5Q14554 519 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 MCM6Q14566 821 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 BEND6Q5SZJ8 279 aaPredicted RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 PPP1R18Q6NYC8 613 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 C10orf71Q711Q0 1435 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 HDXQ7Z353 690 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 LRRC47Q8N1G4 583 aaKnown RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 LARP4BQ92615 738 aaKnown RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 GBP3Q9H0R5 595 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 SEMA6BQ9H3T3 888 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 NHEJ1Q9H9Q4 299 aaPredicted RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 LRRC4BQ9NT99 713 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 BLOC1S4Q9NUP1 217 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 IGKV6D-41A0A0C4DH26 115 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 MYMKA6NI61 221 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 SLC37A4O43826 429 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 TDP2O95551 362 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 FGFR1OPO95684 399 aaKnown RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 GTF2IP78347 998 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 GPS2Q13227 327 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 DPP8Q6V1X1 898 aaPredicted RBP13.29□□□□□ -0.28
TRIM23-203ENST00000381018 HPS3Q969F9 1004 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 PNMA5Q96PV4 448 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 LRRC27Q9C0I9 530 aa13.29□□□□□ -0.28
TRIM23-203ENST00000381018 ABCB11O95342 1321 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 PNMA6FA0A0J9YX94 578 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 TTLL1O95922 423 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 AKR1B1P15121 316 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 PAPD7Q5XG87 772 aaKnown RBP13.28□□□□□ -0.28
TRIM23-203ENST00000381018 KRT79Q5XKE5 535 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 GUF1Q8N442 669 aaKnown RBP13.28□□□□□ -0.28
TRIM23-203ENST00000381018 MSL3Q8N5Y2 521 aaKnown RBP13.28□□□□□ -0.28
TRIM23-203ENST00000381018 SNX29Q8TEQ0 813 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 RAD54LQ92698 747 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.28□□□□□ -0.28
TRIM23-203ENST00000381018 SWAP70Q9UH65 585 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 MYH10P35580 1976 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 ADAMTSL1Q8N6G6 1762 aa13.28□□□□□ -0.28
TRIM23-203ENST00000381018 POTEMA6NI47 508 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ENC1O14682 589 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.28
TRIM23-203ENST00000381018 TNNI2P48788 182 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 LRRC63Q05C16 580 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ZNF543Q08ER8 600 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 VWA3BQ502W6 1294 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 DYMQ7RTS9 669 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.28
TRIM23-203ENST00000381018 TSGA10Q9BZW7 698 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ABCB6Q9NP58 842 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 L1RE1Q9UN81 338 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 TFR2Q9UP52 801 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ANKRD31Q8N7Z5 1873 aa13.27□□□□□ -0.28
TRIM23-203ENST00000381018 ERICH4A6NGS2 130 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
TRIM23-203ENST00000381018 VSNL1P62760 191 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.29
TRIM23-203ENST00000381018 PSMD2Q13200 908 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 TMEM119Q4V9L6 283 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 WDR93Q6P2C0 686 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 COA1Q9GZY4 146 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 NDST4Q9H3R1 872 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
TRIM23-203ENST00000381018 ANO9A1A5B4 782 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
TRIM23-203ENST00000381018 EDIL3O43854 480 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 IDEP14735 1019 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
TRIM23-203ENST00000381018 VAV2P52735 878 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 KIF5AQ12840 1032 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 SPA17Q15506 151 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
TRIM23-203ENST00000381018 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 ADGRF4Q8IZF3 695 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 CUL5Q93034 780 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 CCDC42Q96M95 316 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 PURBQ96QR8 312 aaKnown RBP13.26□□□□□ -0.29
TRIM23-203ENST00000381018 TSG101Q99816 390 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 LACRTQ9GZZ8 138 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 JMJD4Q9H9V9 463 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
TRIM23-203ENST00000381018 SERPINB13Q9UIV8 391 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 PLAGL2Q9UPG8 496 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 SIK3Q9Y2K2 1263 aa13.26□□□□□ -0.29
TRIM23-203ENST00000381018 ATAD5Q96QE3 1844 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms