RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 TUBB2AQ13885 445 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 TUBB2BQ9BVA1 445 aa13.52□□□□□ -0.24
GABPB1-203ENST00000380877 CDC25BP30305 580 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 VAV2P52735 878 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 NACC1Q96RE7 527 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 STAT1P42224 750 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
GABPB1-203ENST00000380877 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
GABPB1-203ENST00000380877 PYCARDQ9ULZ3 195 aa13.52□□□□□ -0.25
GABPB1-203ENST00000380877 NR2F2P24468 414 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 QRICH1Q2TAL8 776 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 GBP6Q6ZN66 633 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 SLC4A9Q96Q91 983 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 SUGCTQ9HAC7 445 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 EIF2AK2P19525 551 aaKnown RBP13.51□□□□□ -0.25
GABPB1-203ENST00000380877 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 KCNB2Q92953 911 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 NOD1Q9Y239 953 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 PPP2R2CQ9Y2T4 447 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 PLA2G4BP0C869 781 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 CCNE1P24864 410 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 CASP14P31944 242 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 LIG4P49917 911 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-203ENST00000380877 PTPN21Q16825 1174 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
GABPB1-203ENST00000380877 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 HHIPL2Q6UWX4 724 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 METTL13Q8N6R0 699 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
GABPB1-203ENST00000380877 SLC5A4Q9NY91 659 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 CTTNBP2NLQ9P2B4 639 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 ZNRF3Q9ULT6 936 aa13.51□□□□□ -0.25
GABPB1-203ENST00000380877 H0YCG3 227 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 GAP43P17677 238 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 POLR2FP61218 127 aaKnown RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 ADGRF4Q8IZF3 695 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 MYRIPQ8NFW9 859 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 IFT81Q8WYA0 676 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 RWDD2AQ9UIY3 292 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 MTUS1Q9ULD2 1270 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 KMT5BQ4FZB7 885 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 CDHR1Q96JP9 859 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 PSMB7Q99436 277 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 PRDM10Q9NQV6 1147 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 ADD3Q9UEY8 706 aaKnown RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 POTEMA6NI47 508 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 RNASE9P60153 205 aaKnown RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 CDC42EP5Q6NZY7 148 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 WRNIP1Q96S55 665 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 GPR75-ASB3A0A0A6YYF3 556 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 RASA1P20936 1047 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 CASP1P29466 404 aa13.5□□□□□ -0.25
GABPB1-203ENST00000380877 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
GABPB1-203ENST00000380877 SLC15A2Q16348 729 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 SEL1L2Q5TEA6 688 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 NRBP2Q9NSY0 501 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 CCNA1P78396 465 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 BHMT2Q9H2M3 363 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 CD19P15391 556 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 U2AF2P26368 475 aaKnown RBP eCLIP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 ARHGAP4P98171 946 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 CUL4BQ13620 913 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 EPN1Q9Y6I3 576 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-203ENST00000380877 ZHX2Q9Y6X8 837 aa13.49□□□□□ -0.25
GABPB1-203ENST00000380877 SPP2Q13103 211 aa13.48□□□□□ -0.25
GABPB1-203ENST00000380877 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.48□□□□□ -0.25
GABPB1-203ENST00000380877 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms