RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 CNNM4Q6P4Q7 775 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 NEDD1Q8NHV4 660 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 PCDHB13Q9Y5F0 798 aa12.18□□□□□ -0.46
DNMT3A-203ENST00000380746 LAMA4Q16363 1823 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 BICDL2A1A5D9 508 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 ZBTB22O15209 634 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 KRT86O43790 486 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 TTLL1O95922 423 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 SLC7A5Q01650 507 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 ADSSL1Q8N142 457 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 CUL5Q93034 780 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 MYO6Q9UM54 1294 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 HSPA1LP34931 641 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 POLR2FP61218 127 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 RASSF7Q02833 373 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 ICA1Q05084 483 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 POTEEQ6S8J3 1075 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 PIGOQ8TEQ8 1089 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 ANKRD65E5RJM6 399 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 NCK2O43639 380 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 BBOX1O75936 387 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 MOCS3O95396 460 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 E2F4Q16254 413 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 ARL6IP4Q66PJ3 421 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 TNFRSF25Q93038 417 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 IFIH1Q9BYX4 1025 aaKnown RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 NHEJ1Q9H9Q4 299 aaPredicted RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 CDC23Q9UJX2 597 aa12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 CTDP1Q9Y5B0 961 aaPredicted RBP12.17□□□□□ -0.46
DNMT3A-203ENST00000380746 CRYBG1Q9Y4K1 1723 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 SLIT2O94813 1529 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 PALM3A6NDB9 673 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 AOC3Q16853 763 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 TBC1D22AQ8WUA7 517 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 IFT81Q8WYA0 676 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 ABCB6Q9NP58 842 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 USO1O60763 962 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 GH2P01242 217 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 MAGEA1P43355 309 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 DNM2P50570 870 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 DMTNQ08495 405 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 SF3A3Q12874 501 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■■□□ 16.8
DNMT3A-203ENST00000380746 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 FAM114A1Q8IWE2 563 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 PACSIN2Q9UNF0 486 aaPredicted RBP12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
DNMT3A-203ENST00000380746 TTC19Q6DKK2 380 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CCDC70Q6NSX1 233 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 SRGAP1Q7Z6B7 1085 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CERS5Q8N5B7 392 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 LACRTQ9GZZ8 138 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 PLEKHG2Q9H7P9 1386 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CCNE1P24864 410 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 EIF4A3P38919 411 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 RCAN1P53805 252 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 TBX2Q13207 712 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 MTA3Q9BTC8 594 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 L2HGDHQ9H9P8 463 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 FAM237AA0A1B0GTK4 181 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 C21orf2O43822 256 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CRKP46108 304 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 QRICH1Q2TAL8 776 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 CDKAL1Q5VV42 579 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 GOLPH3Q9H4A6 298 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 JMJD4Q9H9V9 463 aa12.15□□□□□ -0.46
DNMT3A-203ENST00000380746 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
DNMT3A-203ENST00000380746 LGALS16A8MUM7 142 aa12.14□□□□□ -0.47
DNMT3A-203ENST00000380746 PPIP5K2O43314 1243 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms