RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CPVLQ9H3G5 476 aa27.09■■□□□ 1.93
U2AF1-202ENST00000380276 TNFRSF10AO00220 468 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 ZNF213O14771 459 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 ACTN1P12814 892 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 GPATCH4Q5T3I0 446 aaKnown RBP27.08■■□□□ 1.93
U2AF1-202ENST00000380276 B4GALNT3Q6L9W6 998 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 FTOQ9C0B1 505 aaKnown RBP eCLIP27.08■■□□□ 1.93
U2AF1-202ENST00000380276 PCDHA11Q9Y5I1 949 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 NEDD4P46934 1319 aa27.08■■□□□ 1.93
U2AF1-202ENST00000380276 DHX16O60231 1041 aaKnown RBP27.06■■□□□ 1.92
U2AF1-202ENST00000380276 KPNA6O60684 536 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 SNHG28P0DPA3 235 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 EDNRBP24530 442 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 ASB2Q96Q27 587 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 TSPYL2Q9H2G4 693 aaPredicted RBP27.06■■□□□ 1.92
U2AF1-202ENST00000380276 KAT14Q9H8E8 782 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 SCN5AQ14524 2016 aa27.06■■□□□ 1.92
U2AF1-202ENST00000380276 SDSP20132 328 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 MRPS5P82675 430 aaKnown RBP27.05■■□□□ 1.92
U2AF1-202ENST00000380276 CDC37Q16543 378 aaPredicted RBP27.05■■□□□ 1.92
U2AF1-202ENST00000380276 TMEM67Q5HYA8 995 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 NFRKBQ6P4R8 1299 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 IQCA1Q86XH1 822 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 TICAM2Q86XR7 235 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 PNMA1Q8ND90 353 aa27.05■■□□□ 1.92
U2AF1-202ENST00000380276 SPTBN5Q9NRC6 3674 aaKnown RBP27.05■■□□□ 1.92
U2AF1-202ENST00000380276 ARIH2O95376 493 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 SKIV2LQ15477 1246 aaKnown RBP27.04■■□□□ 1.92
U2AF1-202ENST00000380276 SEPT14Q6ZU15 432 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 VWCEQ96DN2 955 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 CERS4Q9HA82 394 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 DIAPH3Q9NSV4 1193 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 MYO9BQ13459 2157 aa27.04■■□□□ 1.92
U2AF1-202ENST00000380276 A6NJR5 290 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 KDM4AO75164 1064 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 ABCB11O95342 1321 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 CA3P07451 260 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 RFC2P35250 354 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 BFSP2Q13515 415 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 CHST3Q7LGC8 479 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 DGKHQ86XP1 1220 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 ADAMTS19Q8TE59 1207 aa27.03■■□□□ 1.92
U2AF1-202ENST00000380276 CCDC178Q5BJE1 867 aa27.02■■□□□ 1.92
U2AF1-202ENST00000380276 CWC27Q6UX04 472 aaKnown RBP27.02■■□□□ 1.92
U2AF1-202ENST00000380276 TBC1D5Q92609 795 aa27.02■■□□□ 1.92
U2AF1-202ENST00000380276 SCN10AQ9Y5Y9 1956 aa27.02■■□□□ 1.92
U2AF1-202ENST00000380276 B4E1Z4 1266 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 IQCF3P0C7M6 154 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 PTPN11Q06124 597 aaPredicted RBP27.01■■□□□ 1.91
U2AF1-202ENST00000380276 ADGRF4Q8IZF3 695 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 AFG1LQ8WV93 481 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 TAAR1Q96RJ0 339 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 SLC9A7Q96T83 725 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 VAT1LQ9HCJ6 419 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 TANC1Q9C0D5 1861 aa27.01■■□□□ 1.91
U2AF1-202ENST00000380276 RFXAPO00287 272 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 PITPNM1O00562 1244 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 GH1P01241 217 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 PTGISQ16647 500 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 LY6KQ17RY6 165 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 CCDC155Q8N6L0 562 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 RGS22Q8NE09 1264 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 UHRF1Q96T88 793 aaPredicted RBP27■■□□□ 1.91
U2AF1-202ENST00000380276 LAMA4Q16363 1823 aa27■■□□□ 1.91
U2AF1-202ENST00000380276 GTPBP6O43824 516 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-202ENST00000380276 ARHGEF16Q5VV41 709 aa26.99■■□□□ 1.91
U2AF1-202ENST00000380276 MCF2L2Q86YR7 1114 aa26.99■■□□□ 1.91
U2AF1-202ENST00000380276 SYTL5Q8TDW5 730 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-202ENST00000380276 NSUN6Q8TEA1 469 aaKnown RBP26.99■■□□□ 1.91
U2AF1-202ENST00000380276 RMDN3Q96TC7 470 aa26.99■■□□□ 1.91
U2AF1-202ENST00000380276 RWDD1Q9H446 243 aaPredicted RBP26.99■■□□□ 1.91
U2AF1-202ENST00000380276 KIF28PB7ZC32 967 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 MMP3P08254 477 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 STXBP2Q15833 593 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 QRICH1Q2TAL8 776 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 ASPRV1Q53RT3 343 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 FBXO11Q86XK2 927 aa26.98■■□□□ 1.91
U2AF1-202ENST00000380276 ZSCAN10Q96SZ4 725 aaPredicted RBP26.98■■□□□ 1.91
U2AF1-202ENST00000380276 PARP1P09874 1014 aaKnown RBP26.97■■□□□ 1.91
U2AF1-202ENST00000380276 EIF2AK2P19525 551 aaKnown RBP26.97■■□□□ 1.91
U2AF1-202ENST00000380276 KCNJ6P48051 423 aa26.97■■□□□ 1.91
U2AF1-202ENST00000380276 CHD1LQ86WJ1 897 aa26.97■■□□□ 1.91
U2AF1-202ENST00000380276 ARNTL2Q8WYA1 636 aa26.97■■□□□ 1.91
U2AF1-202ENST00000380276 COL20A1Q9P218 1284 aa26.97■■□□□ 1.91
U2AF1-202ENST00000380276 MRPL11Q9Y3B7 192 aaKnown RBP26.97■■□□□ 1.91
U2AF1-202ENST00000380276 CASTP20810 708 aaKnown RBP26.96■■□□□ 1.91
U2AF1-202ENST00000380276 ARHGAP1Q07960 439 aa26.96■■□□□ 1.91
U2AF1-202ENST00000380276 IMMTQ16891 758 aaKnown RBP26.96■■□□□ 1.91
U2AF1-202ENST00000380276 GDF6Q6KF10 455 aaPredicted RBP26.96■■□□□ 1.91
U2AF1-202ENST00000380276 CCDC62Q6P9F0 684 aa26.96■■□□□ 1.91
U2AF1-202ENST00000380276 HERC6Q8IVU3 1022 aa26.96■■□□□ 1.91
U2AF1-202ENST00000380276 PLEKHM2Q8IWE5 1019 aa26.96■■□□□ 1.91
U2AF1-202ENST00000380276 PHOSPHO2Q8TCD6 241 aa26.96■■□□□ 1.91
U2AF1-202ENST00000380276 CHD9Q3L8U1 2897 aa26.95■■□□□ 1.9
U2AF1-202ENST00000380276 CFBP00751 764 aa26.95■■□□□ 1.9
U2AF1-202ENST00000380276 NT5C2P49902 561 aa26.95■■□□□ 1.9
U2AF1-202ENST00000380276 ENAHQ8N8S7 591 aaPredicted RBP26.95■■□□□ 1.9
U2AF1-202ENST00000380276 IWS1Q96ST2 819 aa26.95■■□□□ 1.9
U2AF1-202ENST00000380276 UBAC1Q9BSL1 405 aa26.95■■□□□ 1.9
U2AF1-202ENST00000380276 ALG1Q9BT22 464 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms